Factsheet for Os06t0300600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

cytosol: 19685898

msms PMID: 19685898 doi

KA Doroshenk, AJ Crofts, RT Morris, JJ Wyrick, TW Okita

Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97653	Sorghum	mitochondrion	77.02	80.59
Zm00001d045819_P001	Maize	mitochondrion	78.23	79.51
TraesCS7A01G220600.2	Wheat	mitochondrion	78.63	79.27
EER89645	Sorghum	mitochondrion	78.63	79.27
HORVU7Hr1G045140.1	Barley	plastid	79.03	76.26
GSMUA_Achr3P10850_001	Banana	mitochondrion	70.56	74.47
KRH11491	Soybean	mitochondrion	68.95	74.35
KRH36505	Soybean	mitochondrion	67.34	73.25
KRH06571	Soybean	mitochondrion	67.34	73.25
VIT_15s0046g02140.t01	Wine grape	mitochondrion	66.53	71.12
PGSC0003DMT400082454	Potato	mitochondrion	62.9	68.12
Solyc09g075370.2.1	Tomato	mitochondrion	62.5	67.69
PGSC0003DMT400081319	Potato	mitochondrion	62.5	67.69
HORVU4Hr1G049950.1	Barley	mitochondrion	23.39	66.67
PGSC0003DMT400029970	Potato	cytosol	16.94	64.62
AT1G14620.1	Thale cress	mitochondrion	60.48	64.38
Bra039289.1-P	Field mustard	mitochondrion	60.48	63.56
Bra000413.1-P	Field mustard	mitochondrion	60.89	63.18
CDX83379	Canola	mitochondrion	60.89	63.18
CDX95682	Canola	mitochondrion	59.27	61.51
PGSC0003DMT400029968	Potato	mitochondrion	12.9	60.38
Solyc04g009140.2.1	Tomato	cytosol	52.42	57.52
CDY37090	Canola	mitochondrion	61.29	57.14
HORVU5Hr1G014740.1	Barley	mitochondrion	14.11	56.45
HORVU3Hr1G097430.1	Barley	mitochondrion	14.11	56.45
CDY42008	Canola	cytosol, mitochondrion	30.24	47.17
Bra004566.1-P	Field mustard	cytosol	27.82	45.39

Protein Annotations

Gene3D:3.90.79.10	MapMan:35.2	EntrezGene:4340823	EMBL:AK060668	ProteinID:BAD53489.1	ProteinID:BAF19365.1
ProteinID:BAS97377.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005762	GO:GO:0005840	EnsemblPlantsGene:Os06g0300600
EnsemblPlants:Os06t0300600-01	PANTHER:PTHR13124	UniProt:Q5ZA34	UniParc:UPI0000446D6B	RefSeq:XP_015641545.1	SEG:seg

Description

Similar to Decoy. (Os06t0300600-01)

Coordinates

chr6:-:11204807..11208076

Molecular Weight (calculated)

28296.8 Da

IEP (calculated)

9.626

GRAVY (calculated)

-0.419

Length

248 amino acids

Sequence
(BLAST)

001: MLLRSPARSS PHLRSLLRAR GFISSASPSA ATAAEGDDGK IVASVLFERL PVVIPKIHPV VYAFQEFSFR WRQQYRRKYP DDVLGKADAR GKGDYQIDYV
101: PAPRITDADK TNDRKSLQRA LDNRLYLLLY GKAYGAPDDK PVWHFPEKVY DNEDTLRLCA ESALKSVLGG LNNTYFVGNA PMAHMVVDQK EDSSISSFKR
201: FFFKSQVVGA TKYDIGKCQD HVWVTKDELL EYFPEHKAFF NKMIIHIR

Best Arabidopsis Sequence Match ( AT1G14620.1 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.