CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89645	Sorghum	mitochondrion	85.23	82.11
Os06t0300600-01	Rice	cytosol, mitochondrion	80.59	77.02
TraesCS7A01G220600.2	Wheat	mitochondrion	78.9	76.02
HORVU7Hr1G045140.1	Barley	plastid	81.43	75.1
GSMUA_Achr3P10850_001	Banana	mitochondrion	70.89	71.49
KRH06571	Soybean	mitochondrion	67.93	70.61
KRH11491	Soybean	mitochondrion	68.35	70.43
KRH36505	Soybean	mitochondrion	67.09	69.74
VIT_15s0046g02140.t01	Wine grape	mitochondrion	65.82	67.24
HORVU4Hr1G049950.1	Barley	mitochondrion	24.05	65.52
PGSC0003DMT400081319	Potato	mitochondrion	62.87	65.07
Solyc09g075370.2.1	Tomato	mitochondrion	62.03	64.19
PGSC0003DMT400082454	Potato	mitochondrion	62.03	64.19
AT1G14620.1	Thale cress	mitochondrion	58.65	59.66
Bra000413.1-P	Field mustard	mitochondrion	59.07	58.58
CDX83379	Canola	mitochondrion	59.07	58.58
Bra039289.1-P	Field mustard	mitochondrion	58.23	58.47
CDX95682	Canola	mitochondrion	58.23	57.74
PGSC0003DMT400029968	Potato	mitochondrion	12.66	56.6
PGSC0003DMT400029970	Potato	cytosol	15.19	55.38
HORVU3Hr1G097430.1	Barley	mitochondrion	14.35	54.84
HORVU5Hr1G014740.1	Barley	mitochondrion	14.35	54.84
Solyc04g009140.2.1	Tomato	cytosol	51.48	53.98
CDY37090	Canola	mitochondrion	58.65	52.26
CDY42008	Canola	cytosol, mitochondrion	29.96	44.65
Bra004566.1-P	Field mustard	cytosol	27.85	43.42

Protein Annotations

Gene3D:3.90.79.10	MapMan:35.2	EntrezGene:8073115	UniProt:C5X419	EnsemblPlants:EER97653	ProteinID:EER97653
ProteinID:EER97653.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005762	GO:GO:0005840	PANTHER:PTHR13124
EnsemblPlantsGene:SORBI_3002G397900	unigene:Sbi.21695	unigene:Sbi.675	UniParc:UPI0001A83487	RefSeq:XP_002461132.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:74943876..74949168

Molecular Weight (calculated)

27173.4 Da

IEP (calculated)

9.372

GRAVY (calculated)

-0.500

Length

237 amino acids

Sequence
(BLAST)

001: MASLLLRSLR RARGFSSSAT SAAKEGGDGK LVATVMFERL PVVIPKIHPA VYAFQEFSFR WRQQHRRQYP DEVLGKADAR GKGDYHIDYV PAPRITEADR
101: TNDQKSLQRA LDNKLYLLLY GNTYGAPDGK SVWHFPEKIY ENEETMRLCA ESALKSVLGG LDNTYFVGNA PMAHMDVEQT DSSVSSFKRF FFKSQVVGTT
201: KYHIEKCKDY AWVTKDELLE HFPEHKSFLN KMIIHIR

Best Arabidopsis Sequence Match ( AT1G14620.1 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.