CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045819_P001	Maize	mitochondrion	96.75	97.54
EER97653	Sorghum	mitochondrion	82.11	85.23
Os06t0300600-01	Rice	cytosol, mitochondrion	79.27	78.63
TraesCS7A01G220600.2	Wheat	mitochondrion	78.46	78.46
KRH06571	Soybean	mitochondrion	67.89	73.25
HORVU7Hr1G045140.1	Barley	plastid	76.02	72.76
KRH11491	Soybean	mitochondrion	67.89	72.61
KRH36505	Soybean	mitochondrion	67.07	72.37
GSMUA_Achr3P10850_001	Banana	mitochondrion	68.7	71.91
VIT_15s0046g02140.t01	Wine grape	mitochondrion	64.63	68.53
HORVU4Hr1G049950.1	Barley	mitochondrion	23.58	66.67
Solyc09g075370.2.1	Tomato	mitochondrion	61.38	65.94
PGSC0003DMT400082454	Potato	mitochondrion	61.38	65.94
PGSC0003DMT400081319	Potato	mitochondrion	61.38	65.94
AT1G14620.1	Thale cress	mitochondrion	58.54	61.8
Bra000413.1-P	Field mustard	mitochondrion	59.76	61.51
CDX83379	Canola	mitochondrion	59.76	61.51
Bra039289.1-P	Field mustard	mitochondrion	58.13	60.59
CDX95682	Canola	mitochondrion	58.54	60.25
PGSC0003DMT400029968	Potato	mitochondrion	12.6	58.49
HORVU5Hr1G014740.1	Barley	mitochondrion	14.63	58.06
HORVU3Hr1G097430.1	Barley	mitochondrion	14.63	58.06
PGSC0003DMT400029970	Potato	cytosol	14.63	55.38
Solyc04g009140.2.1	Tomato	cytosol	50.81	55.31
CDY37090	Canola	mitochondrion	58.54	54.14
CDY42008	Canola	cytosol, mitochondrion	28.86	44.65
Bra004566.1-P	Field mustard	cytosol	27.24	44.08

Protein Annotations

EnsemblPlants:EER89645	EnsemblPlantsGene:SORBI_3010G125100	EntrezGene:8076433	Gene3D:3.90.79.10	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005762	GO:GO:0005840	PANTHER:PTHR13124	ProteinID:EER89645	ProteinID:EER89645.1	RefSeq:XP_002438278.1
SEG:seg	unigene:Sbi.20950	UniParc:UPI0001A89AD2	UniProt:C5Z942	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr10:-:15309432..15314235

Molecular Weight (calculated)

28122.7 Da

IEP (calculated)

9.738

GRAVY (calculated)

-0.396

Length

246 amino acids

Sequence
(BLAST)

001: MLSRLPATVS LLRRSLREPR GFSSSASSVA SSKATADGKL VASVLFERLP VVIPKIHPVV YAFQEFSFRW RQQYRRQYPE EVLGKADARG KGDYHIDYVP
101: APRITEADKT NDRKSLQRAL DNKLYLLLYG NAYGAPDGKP VWHFPEKVYE NEETMRLCAE AALKSVLGGL DHTYFVGNAP MAHMAVEQTD SSVSPFKRFF
201: FKSQVVGTTK YHIGKCKDFA WVTKDELLEY FPENKDFFNK MIIHIR

Best Arabidopsis Sequence Match ( AT1G14620.1 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.