Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g009140.2.1 | Tomato | cytosol | 95.38 | 27.43 |
| PGSC0003DMT400082454 | Potato | mitochondrion | 93.85 | 26.64 |
| PGSC0003DMT400081319 | Potato | mitochondrion | 93.85 | 26.64 |
| CDY42008 | Canola | cytosol, mitochondrion | 56.92 | 23.27 |
| Bra004566.1-P | Field mustard | cytosol | 53.85 | 23.03 |
| KRH06571 | Soybean | mitochondrion | 78.46 | 22.37 |
| KRH11491 | Soybean | mitochondrion | 75.38 | 21.3 |
| KRH36505 | Soybean | mitochondrion | 73.85 | 21.05 |
| VIT_15s0046g02140.t01 | Wine grape | mitochondrion | 72.31 | 20.26 |
| AT1G14620.1 | Thale cress | mitochondrion | 69.23 | 19.31 |
| Bra000413.1-P | Field mustard | mitochondrion | 69.23 | 18.83 |
| CDX83379 | Canola | mitochondrion | 69.23 | 18.83 |
| Bra039289.1-P | Field mustard | mitochondrion | 67.69 | 18.64 |
| CDX95682 | Canola | mitochondrion | 66.15 | 17.99 |
| GSMUA_Achr3P10850_001 | Banana | mitochondrion | 64.62 | 17.87 |
| Os06t0300600-01 | Rice | cytosol, mitochondrion | 64.62 | 16.94 |
| CDY37090 | Canola | mitochondrion | 67.69 | 16.54 |
| TraesCS7A01G220600.2 | Wheat | mitochondrion | 58.46 | 15.45 |
| EER97653 | Sorghum | mitochondrion | 55.38 | 15.19 |
| Zm00001d045819_P001 | Maize | mitochondrion | 55.38 | 14.75 |
| EER89645 | Sorghum | mitochondrion | 55.38 | 14.63 |
| PGSC0003DMT400029968 | Potato | mitochondrion | 0.0 | 0.0 |
| HORVU7Hr1G095440.1 | Barley | extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400029970 | EnsemblPlantsGene:PGSC0003DMG402011505 | Gene3D:3.90.79.10 | PANTHER:PTHR13124 | PGSC:PGSC0003DMG402011505 | UniParc:UPI000296C0C4 |
| UniProt:M1ATL5 | MapMan:35.2 | : | : | : | : |
Description
DECOY [Source:PGSC_GENE;Acc:PGSC0003DMG402011505]
Coordinates
chr4:-:4681663..4684657
Molecular Weight (calculated)
7716.5 Da
IEP (calculated)
9.225
GRAVY (calculated)
-0.263
Length
65 amino acids
Sequence
(BLAST)
(BLAST)
1: MGHMVTQPTE DKKIPSIKRF FFKSQVIAAN KFDIRKCDDF VWVTKDELLE YFPKQAEFLS KMIIS
001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS
Arabidopsis Description
DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.