Factsheet for PGSC0003DMT400081319

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1
plasma membrane 1
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g075370.2.1	Tomato	mitochondrion	97.82	97.82
PGSC0003DMT400082454	Potato	mitochondrion	95.2	95.2
PGSC0003DMT400029970	Potato	cytosol	26.64	93.85
PGSC0003DMT400029968	Potato	mitochondrion	20.96	90.57
VIT_15s0046g02140.t01	Wine grape	mitochondrion	75.98	75.0
KRH06571	Soybean	mitochondrion	74.24	74.56
KRH36505	Soybean	mitochondrion	73.8	74.12
KRH11491	Soybean	mitochondrion	72.93	72.61
GSMUA_Achr3P10850_001	Banana	mitochondrion	69.0	67.23
AT1G14620.1	Thale cress	mitochondrion	65.07	63.95
EER97653	Sorghum	mitochondrion	65.07	62.87
Os06t0300600-01	Rice	cytosol, mitochondrion	67.69	62.5
Bra000413.1-P	Field mustard	mitochondrion	65.07	62.34
CDX83379	Canola	mitochondrion	65.07	62.34
Bra039289.1-P	Field mustard	mitochondrion	64.19	62.29
HORVU7Hr1G095440.1	Barley	extracellular, vacuole	11.35	61.9
Zm00001d045819_P001	Maize	mitochondrion	65.94	61.89
EER89645	Sorghum	mitochondrion	65.94	61.38
TraesCS7A01G220600.2	Wheat	mitochondrion	65.94	61.38
CDX95682	Canola	mitochondrion	63.76	61.09
CDY37090	Canola	mitochondrion	64.63	55.64
CDY42008	Canola	cytosol, mitochondrion	34.06	49.06
Bra004566.1-P	Field mustard	cytosol	31.44	47.37

Protein Annotations

EnsemblPlants:PGSC0003DMT400081319	EnsemblPlantsGene:PGSC0003DMG400031793	EntrezGene:102605683	Gene3D:3.90.79.10	PANTHER:PTHR13124	PGSC:PGSC0003DMG400031793
RefSeq:XP_006359862.1	UniParc:UPI0002962659	UniProt:M1D4K2	MapMan:35.2	:	:

Description

DECOY [Source:PGSC_GENE;Acc:PGSC0003DMG400031793]

Coordinates

chr9:+:52879399..52883454

Molecular Weight (calculated)

26784.9 Da

IEP (calculated)

9.280

GRAVY (calculated)

-0.557

Length

229 amino acids

Sequence
(BLAST)

001: MQRCCSSAGR SVISKRWFSS SSNDKIVASV LFERLPVVVP KIDPTVYAFQ EFSFRWRQQY RREYPESFLK KSDTRGKGDY QIDYKPAPRI SEADKTNDQR
101: SLQRALDRRL YLLVHGTTHG SGKPVWHFPE KIYESEENLR KCAESALESF IGDLSHTYFV GNAPMGHMVI QPTEDKKIPS IKRFFFKSQV IAVNKFDIRK
201: CDDFVWVTKD ELLEYFPEQA EFLNKMIIS

Best Arabidopsis Sequence Match ( AT1G14620.1 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.