CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71198	Soybean	cytosol	85.37	59.66
KRH71201	Soybean	cytosol	77.24	53.98
KRH71196	Soybean	cytosol	77.24	53.98
KRH50228	Soybean	cytosol	77.24	53.98
KRH71199	Soybean	cytosol	76.42	53.41
KRH50226	Soybean	cytosol	76.42	53.26
KRH71195	Soybean	cytosol	58.13	39.94
KRH49793	Soybean	cytosol	55.69	39.94
KRH49792	Soybean	nucleus	46.34	39.72
KRG89226	Soybean	cytosol	56.91	38.46
VIT_03s0063g01220.t01	Wine grape	cytosol	14.23	36.84
KRH16465	Soybean	cytosol, nucleus, peroxisome	32.93	21.54
KRH65199	Soybean	cytosol	33.33	21.47
KRH53327	Soybean	cytosol	31.71	21.31
KRH18058	Soybean	cytosol	31.71	20.8
KRH48309	Soybean	cytosol	33.33	20.71
KRH64596	Soybean	cytosol	30.49	19.84
KRH38652	Soybean	cytosol	30.08	19.37
KRH35405	Soybean	cytosol	28.46	19.18
KRG91415	Soybean	cytosol	29.67	19.06
KRH09174	Soybean	cytosol	22.36	18.09
KRH64020	Soybean	cytosol	28.05	17.6
KRH53918	Soybean	cytosol, nucleus, peroxisome	26.42	17.15
Solyc09g018420.1.1	Tomato	cytosol	6.5	15.38
Solyc09g042210.1.1	Tomato	cytosol, mitochondrion, nucleus, peroxisome	8.13	15.38

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02004670	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_07G209000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:K7L2Y4	EnsemblPlants:KRH50227
ProteinID:KRH50227	ProteinID:KRH50227.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF98	SUPFAM:SSF51197	UniParc:UPI000296B15A	:	:

Description

hypothetical protein

Coordinates

chr7:+:37877962..37879703

Molecular Weight (calculated)

28496.9 Da

IEP (calculated)

5.595

GRAVY (calculated)

-0.454

Length

246 amino acids

Sequence
(BLAST)

001: MGEVDPAFIQ YLQHRPKFST IQPEDIPVID ISPITNHTAS DPCSIGGLVK EIRNASKEWG FFQLSNHAVP LTLRQNIEKA SRLFFTQNLE EKRKVSKDEN
101: NTTGYHDREH PKNIRDWKEV VIIQEYIQEM EKLCFKLLEL IALSLGVEAK RFEELFIKDQ TSSILLNCYP PCPYPHLAHG VVKPTPDAYT INFGDIIQVW
201: SNDAYESVEH RVVVNSEKER FSIPFFYLSH ETEVKPLEKL INEQNP

Best Arabidopsis Sequence Match ( AT3G19000.1 )
(BLAST)

001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.