Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38652 | Soybean | cytosol | 95.39 | 75.92 |
| KRH35405 | Soybean | cytosol | 77.96 | 64.93 |
| KRG91415 | Soybean | cytosol | 78.29 | 62.14 |
| PGSC0003DMT400042644 | Potato | cytosol | 65.46 | 59.23 |
| VIT_16s0022g02310.t01 | Wine grape | cytosol | 73.03 | 58.12 |
| PGSC0003DMT400062314 | Potato | cytosol | 69.08 | 55.56 |
| Solyc03g006880.2.1 | Tomato | cytosol | 69.08 | 55.56 |
| PGSC0003DMT400090397 | Potato | cytosol | 66.45 | 54.16 |
| PGSC0003DMT400071866 | Potato | cytosol | 66.78 | 54.13 |
| PGSC0003DMT400036523 | Potato | cytosol | 54.61 | 53.38 |
| Solyc06g035530.2.1 | Tomato | cytosol | 64.8 | 52.96 |
| Solyc09g009110.2.1 | Tomato | cytosol | 65.46 | 52.65 |
| PGSC0003DMT400086432 | Potato | cytosol | 26.97 | 52.56 |
| PGSC0003DMT400092587 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 27.63 | 52.17 |
| Solyc11g072310.1.1 | Tomato | cytosol | 64.8 | 51.98 |
| PGSC0003DMT400091205 | Potato | cytosol, nucleus, peroxisome | 26.97 | 51.9 |
| Solyc06g050110.1.1 | Tomato | cytosol | 61.51 | 51.52 |
| KRH65199 | Soybean | cytosol | 62.17 | 49.48 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 58.55 | 49.44 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 58.55 | 49.31 |
| TraesCS5B01G560300.1 | Wheat | cytosol, peroxisome, plastid | 58.22 | 48.23 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 57.89 | 48.22 |
| KRH48309 | Soybean | cytosol | 62.5 | 47.98 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 48.03 | 47.4 |
| EER90481 | Sorghum | cytosol | 57.57 | 46.17 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 47.04 | 45.69 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 54.93 | 44.89 |
| Zm00001d034898_P001 | Maize | plastid | 57.89 | 43.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.72 | 43.03 |
| Solyc10g045690.1.1 | Tomato | cytosol, nucleus, peroxisome | 26.64 | 42.63 |
| PGSC0003DMT400088638 | Potato | cytosol | 34.87 | 41.9 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 48.68 | 41.57 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 48.36 | 41.06 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 47.7 | 40.62 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 48.03 | 40.56 |
| CDY13228 | Canola | cytosol | 9.87 | 40.54 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 47.04 | 39.83 |
| PGSC0003DMT400088528 | Potato | cytosol, peroxisome, plastid | 16.78 | 39.53 |
| Os07t0169700-01 | Rice | plasma membrane | 47.7 | 39.51 |
| Solyc10g045770.1.1 | Tomato | cytosol | 13.82 | 38.53 |
| EER95912 | Sorghum | cytosol | 48.36 | 38.48 |
| Zm00001d007894_P001 | Maize | cytosol | 49.34 | 38.07 |
| KRH53918 | Soybean | cytosol, nucleus, peroxisome | 47.37 | 37.99 |
| PGSC0003DMT400090198 | Potato | mitochondrion | 11.18 | 37.78 |
| KRH16465 | Soybean | cytosol, nucleus, peroxisome | 46.71 | 37.77 |
| KRH53327 | Soybean | cytosol | 45.39 | 37.7 |
| KRH18058 | Soybean | cytosol | 46.38 | 37.6 |
| KRH64020 | Soybean | cytosol | 48.36 | 37.5 |
| KRH64596 | Soybean | cytosol | 46.38 | 37.3 |
| PGSC0003DMT400091526 | Potato | cytosol | 29.28 | 37.24 |
| Solyc10g046820.1.1 | Tomato | cytosol, nucleus, peroxisome | 24.01 | 37.06 |
| PGSC0003DMT400089703 | Potato | nucleus | 18.09 | 36.67 |
| CDY13227 | Canola | cytosol | 20.07 | 35.67 |
| PGSC0003DMT400097234 | Potato | cytosol, mitochondrion, plastid | 13.82 | 33.33 |
| KRH50228 | Soybean | cytosol | 30.26 | 26.14 |
| KRH71196 | Soybean | cytosol | 29.61 | 25.57 |
| PGSC0003DMT400086504 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 9.21 | 24.78 |
| KRH50226 | Soybean | cytosol | 28.62 | 24.65 |
| KRH49793 | Soybean | cytosol | 27.3 | 24.2 |
| KRH71198 | Soybean | cytosol | 27.63 | 23.86 |
| KRH71199 | Soybean | cytosol | 27.63 | 23.86 |
| KRH71201 | Soybean | cytosol | 27.3 | 23.58 |
| KRG89226 | Soybean | cytosol | 27.3 | 22.8 |
| KRH71195 | Soybean | cytosol | 26.64 | 22.63 |
| KRH50227 | Soybean | cytoskeleton, cytosol, peroxisome | 18.09 | 22.36 |
| KRH49792 | Soybean | nucleus | 21.05 | 22.3 |
Protein Annotations
| EntrezGene:100305379 | Gene3D:2.60.120.330 | MapMan:50.1.13 | EMBL:ACUP02010273 | UniProt:C6ZIG0 | InterPro:DIOX_N |
| EMBL:EU884445 | EnsemblPlantsGene:GLYMA_16G200800 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | EnsemblPlants:KRH09174 | ProteinID:KRH09174 | ProteinID:KRH09174.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF140 | SUPFAM:SSF51197 | UniParc:UPI0001B067F4 |
Description
hypothetical protein
Coordinates
chr16:+:36219135..36220500
Molecular Weight (calculated)
34379.0 Da
IEP (calculated)
5.163
GRAVY (calculated)
-0.292
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIECITNIQ SMSQPQKHHQ DHKEDEAPLV FDASLLRHEL NLPKQFIWPD EEKPCMNVPE LAVPLIDLGG FISGDPVATM EAARMVGEAC QKHGFFLVVN
101: HGIDAKLISH AHSYMDDFFE IPLSQKQRAQ RKTGEHCGYA SSFTGRRVYQ DYCDAMSNLS LGIMELLGMS LGVGKACFSE FFEENNSIMR LNYYPPCQKP
201: DLTLGTGPHC DPTSLTILHQ DQVGGLQVFV DNEWHSVSPN FNAFVVNIGD KVVSPPSELV DDLTPRVYPD FTWPMLLEFT QKHYRADIKT LEAFTNWLLQ
301: RKTN
101: HGIDAKLISH AHSYMDDFFE IPLSQKQRAQ RKTGEHCGYA SSFTGRRVYQ DYCDAMSNLS LGIMELLGMS LGVGKACFSE FFEENNSIMR LNYYPPCQKP
201: DLTLGTGPHC DPTSLTILHQ DQVGGLQVFV DNEWHSVSPN FNAFVVNIGD KVVSPPSELV DDLTPRVYPD FTWPMLLEFT QKHYRADIKT LEAFTNWLLQ
301: RKTN
001: MECIIKLPQR FNKNKSKKNP LRIFDSTVLN HQPDHIPQEF VWPDHEKPSK NVPILQVPVI DLAGFLSNDP LLVSEAERLV SEAAKKHGFF LVTNHGVDER
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
Arabidopsis Description
GA20OX4Gibberellin 20 oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C955]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.