Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g045770.1.1 | Tomato | cytosol | 24.74 | 43.12 |
| Solyc09g042210.1.1 | Tomato | cytosol, mitochondrion, nucleus, peroxisome | 25.79 | 37.69 |
| Solyc09g018420.1.1 | Tomato | cytosol | 19.47 | 35.58 |
| Solyc06g050110.1.1 | Tomato | cytosol | 64.21 | 33.61 |
| Solyc03g006880.2.1 | Tomato | cytosol | 66.84 | 33.6 |
| Solyc09g009110.2.1 | Tomato | cytosol | 66.32 | 33.33 |
| PGSC0003DMT400091526 | Potato | cytosol | 41.58 | 33.05 |
| Solyc11g072310.1.1 | Tomato | cytosol | 65.79 | 32.98 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 53.16 | 32.79 |
| Solyc10g046820.1.1 | Tomato | cytosol, nucleus, peroxisome | 33.68 | 32.49 |
| KRH38652 | Soybean | cytosol | 62.63 | 31.15 |
| PGSC0003DMT400088528 | Potato | cytosol, peroxisome, plastid | 21.05 | 31.01 |
| Solyc06g035530.2.1 | Tomato | cytosol | 60.53 | 30.91 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 49.47 | 30.03 |
| VIT_16s0022g02310.t01 | Wine grape | cytosol | 59.47 | 29.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.47 | 29.1 |
| KRG91415 | Soybean | cytosol | 57.89 | 28.72 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 53.16 | 28.06 |
| Solyc01g093980.2.1 | Tomato | cytosol | 53.68 | 28.02 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 52.11 | 27.42 |
| TraesCS5B01G560300.1 | Wheat | cytosol, peroxisome, plastid | 52.63 | 27.25 |
| KRH35405 | Soybean | cytosol | 52.11 | 27.12 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 51.58 | 26.85 |
| KRH09174 | Soybean | cytosol | 42.63 | 26.64 |
| PGSC0003DMT400088638 | Potato | cytosol | 34.74 | 26.09 |
| EER90481 | Sorghum | cytosol | 51.05 | 25.59 |
| PGSC0003DMT400097234 | Potato | cytosol, mitochondrion, plastid | 16.84 | 25.4 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 48.95 | 25.0 |
| Zm00001d034898_P001 | Maize | plastid | 50.53 | 23.76 |
| Solyc11g013360.1.1 | Tomato | cytosol | 41.58 | 22.9 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 41.05 | 21.91 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 41.05 | 21.79 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 40.53 | 21.57 |
| Os07t0169700-01 | Rice | plasma membrane | 41.58 | 21.53 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 40.53 | 21.45 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 40.53 | 21.39 |
| Zm00001d007894_P001 | Maize | cytosol | 40.53 | 19.54 |
| EER95912 | Sorghum | cytosol | 38.95 | 19.37 |
| Solyc01g108880.2.1 | Tomato | cytosol, extracellular | 27.89 | 15.14 |
| Solyc12g013780.1.1 | Tomato | cytosol | 28.95 | 14.75 |
| Solyc01g108860.2.1 | Tomato | cytosol | 24.21 | 13.11 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:35.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009686 | GO:GO:0009719 | GO:GO:0009740 |
| GO:GO:0009791 | GO:GO:0009826 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0016491 | GO:GO:0040007 | GO:GO:0045544 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | UniProt:K4CZT3 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF140 |
| SUPFAM:SSF51197 | EnsemblPlantsGene:Solyc10g045690.1 | EnsemblPlants:Solyc10g045690.1.1 | UniParc:UPI0002769A33 | : | : |
Description
No Description!
Coordinates
chr10:-:35042314..35043450
Molecular Weight (calculated)
22456.3 Da
IEP (calculated)
10.319
GRAVY (calculated)
-0.409
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMFFDITLS EKNKTQRKNR EHCVYAIIFT GRFSLKRLWK ETFSLQNSIQ KGSSHIVEEY LQRTMSTLSL TIMELLGMSL GVQKSHFKSF LEDNESIMRL
101: QYFLPRQNPE LTLGTRPQYD PTSLTLLHHV LVCKLQVFED NKWYSIRPNF NDFVFKIGLS NGRYTSCSHR TMFNNKTPRK SLALFLRPVR
101: QYFLPRQNPE LTLGTRPQYD PTSLTLLHHV LVCKLQVFED NKWYSIRPNF NDFVFKIGLS NGRYTSCSHR TMFNNKTPRK SLALFLRPVR
001: MECIIKLPQR FNKNKSKKNP LRIFDSTVLN HQPDHIPQEF VWPDHEKPSK NVPILQVPVI DLAGFLSNDP LLVSEAERLV SEAAKKHGFF LVTNHGVDER
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
Arabidopsis Description
GA20OX4Gibberellin 20 oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C955]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.