Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G399800.1 | Wheat | cytosol | 96.07 | 95.53 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 95.22 | 94.17 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 94.94 | 94.15 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 89.04 | 88.8 |
| Os07t0169700-01 | Rice | plasma membrane | 75.28 | 73.02 |
| EER95912 | Sorghum | cytosol | 71.63 | 66.75 |
| Zm00001d007894_P001 | Maize | cytosol | 71.35 | 64.47 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 58.43 | 57.62 |
| PGSC0003DMT400086432 | Potato | cytosol | 24.72 | 56.41 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 48.6 | 56.17 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 48.03 | 54.63 |
| CDY72226 | Canola | mitochondrion | 39.61 | 54.44 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 50.84 | 51.71 |
| KRG91415 | Soybean | cytosol | 55.34 | 51.44 |
| Bra019165.1-P | Field mustard | cytosol | 50.56 | 51.43 |
| VIT_16s0022g02310.t01 | Wine grape | cytosol | 55.06 | 51.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.35 | 51.08 |
| KRH38652 | Soybean | cytosol | 54.21 | 50.52 |
| PGSC0003DMT400036523 | Potato | cytosol | 44.1 | 50.48 |
| Solyc01g093980.2.1 | Tomato | cytosol | 51.4 | 50.27 |
| PGSC0003DMT400091205 | Potato | cytosol, nucleus, peroxisome | 22.19 | 50.0 |
| PGSC0003DMT400062314 | Potato | cytosol | 53.09 | 50.0 |
| PGSC0003DMT400000036 | Potato | cytosol | 51.12 | 49.86 |
| KRH35405 | Soybean | cytosol | 50.84 | 49.59 |
| Solyc03g006880.2.1 | Tomato | cytosol | 52.25 | 49.21 |
| VIT_15s0048g01320.t01 | Wine grape | cytosol | 52.81 | 48.96 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 51.69 | 48.94 |
| Bra022565.1-P | Field mustard | cytosol | 51.69 | 48.81 |
| KRH65199 | Soybean | cytosol | 52.25 | 48.69 |
| KRH09174 | Soybean | cytosol | 41.57 | 48.68 |
| Bra013890.1-P | Field mustard | cytosol | 51.4 | 48.67 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 51.4 | 48.67 |
| Solyc11g072310.1.1 | Tomato | cytosol | 51.69 | 48.55 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 51.69 | 48.55 |
| AT4G25420.1 | Thale cress | cytosol, nucleus, peroxisome | 51.4 | 48.54 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 51.4 | 48.54 |
| PGSC0003DMT400092587 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 21.91 | 48.45 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 51.4 | 48.41 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 37.92 | 48.39 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 51.4 | 48.28 |
| Bra009285.1-P | Field mustard | cytosol | 51.4 | 48.28 |
| PGSC0003DMT400090397 | Potato | cytosol | 50.56 | 48.26 |
| PGSC0003DMT400042644 | Potato | cytosol | 45.51 | 48.21 |
| AT5G07200.1 | Thale cress | cytosol, nucleus, peroxisome | 51.4 | 48.16 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 51.12 | 48.02 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 51.12 | 48.02 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 51.12 | 47.89 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 50.84 | 47.88 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 50.84 | 47.63 |
| Bra028277.1-P | Field mustard | cytosol, nucleus, peroxisome | 50.84 | 47.63 |
| AT5G51810.1 | Thale cress | cytosol, nucleus, peroxisome | 50.56 | 47.62 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 50.56 | 47.62 |
| KRH48309 | Soybean | cytosol | 52.81 | 47.47 |
| PGSC0003DMT400071866 | Potato | cytosol | 50.0 | 47.47 |
| AT1G60980.1 | Thale cress | cytosol, mitochondrion, peroxisome | 50.0 | 47.34 |
| Solyc06g035530.2.1 | Tomato | cytosol | 49.44 | 47.31 |
| CDY13228 | Canola | cytosol | 9.83 | 47.3 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 50.84 | 47.26 |
| Bra005927.1-P | Field mustard | cytosol | 43.26 | 47.24 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 50.28 | 47.23 |
| Bra028706.1-P | Field mustard | cytosol | 50.0 | 46.97 |
| Solyc09g009110.2.1 | Tomato | cytosol | 49.16 | 46.3 |
| Bra027106.1-P | Field mustard | cytosol | 48.6 | 46.01 |
| Solyc06g050110.1.1 | Tomato | cytosol | 46.35 | 45.45 |
| PGSC0003DMT400088638 | Potato | cytosol | 32.02 | 45.06 |
| Bra010064.1-P | Field mustard | cytosol | 47.19 | 44.56 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 47.47 | 44.36 |
| PGSC0003DMT400090198 | Potato | mitochondrion | 10.96 | 43.33 |
| Bra039251.1-P | Field mustard | cytosol | 45.51 | 43.32 |
| CDY64867 | Canola | cytosol | 45.22 | 43.05 |
| Bra031467.1-P | Field mustard | cytosol | 45.51 | 42.97 |
| TraesCS1D01G263700.1 | Wheat | cytosol | 49.16 | 42.48 |
| PGSC0003DMT400088528 | Potato | cytosol, peroxisome, plastid | 15.17 | 41.86 |
| TraesCS3D01G401400.1 | Wheat | plastid | 50.84 | 41.51 |
| PGSC0003DMT400091526 | Potato | cytosol | 27.81 | 41.42 |
| Solyc10g045690.1.1 | Tomato | cytosol, nucleus, peroxisome | 21.91 | 41.05 |
| CDY44829 | Canola | cytosol | 44.94 | 40.92 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 48.6 | 40.9 |
| CDY60083 | Canola | vacuole | 45.79 | 40.55 |
| PGSC0003DMT400097234 | Potato | cytosol, mitochondrion, plastid | 14.33 | 40.48 |
| Solyc10g045770.1.1 | Tomato | cytosol | 12.36 | 40.37 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 34.55 | 39.68 |
| PGSC0003DMT400086504 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 12.08 | 38.05 |
| CDY13227 | Canola | cytosol | 18.26 | 38.01 |
| PGSC0003DMT400089703 | Potato | nucleus | 14.61 | 34.67 |
| Solyc10g046820.1.1 | Tomato | cytosol, nucleus, peroxisome | 17.98 | 32.49 |
| TraesCS4D01G079900.1 | Wheat | cytosol | 30.06 | 30.75 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G393900.1 | EnsemblPlantsGene:TraesCS3D01G393900 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF118 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PRINTS:PR00682 | SEG:seg | SUPFAM:SSF51197 | MapMan:11.6.1.5 | : |
Description
No Description!
Coordinates
chr3D:+:508612922..508614564
Molecular Weight (calculated)
39157.5 Da
IEP (calculated)
6.433
GRAVY (calculated)
-0.137
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLVFDAAV LSRKDDIPPQ FVWPADEAPS VDGVEEIAVP VVDLAGFLAG DGAAGLRDLA AACEKHGFFQ VVNHGVDPAL LAKAYRCCDA FYVLPLAEKQ
101: RAQRRLGENH GYAGSFVGRF GSKLPWKETM SFNCSAAPEG ARKVVDYFVG VLGEEYRDMG EVWQEYCDEM TRLALDVTDV LAACLGLGRG ALRGFFAGDA
201: SQMRLNRYPP CQQPHLTLGT GPHHDPTSLT LLHQDDVGGL EVFTGGAWHA VRPRSDAFVV NIGDTFSALT NGRHISCLHR AVVNSSLTRR SLTFFLSPQL
301: DRLVAPPAEL LAIDGRPRAY PDFTWREFLE FTQKHYRSGW RTLDAFAAWI NQGRKG
101: RAQRRLGENH GYAGSFVGRF GSKLPWKETM SFNCSAAPEG ARKVVDYFVG VLGEEYRDMG EVWQEYCDEM TRLALDVTDV LAACLGLGRG ALRGFFAGDA
201: SQMRLNRYPP CQQPHLTLGT GPHHDPTSLT LLHQDDVGGL EVFTGGAWHA VRPRSDAFVV NIGDTFSALT NGRHISCLHR AVVNSSLTRR SLTFFLSPQL
301: DRLVAPPAEL LAIDGRPRAY PDFTWREFLE FTQKHYRSGW RTLDAFAAWI NQGRKG
001: MECIIKLPQR FNKNKSKKNP LRIFDSTVLN HQPDHIPQEF VWPDHEKPSK NVPILQVPVI DLAGFLSNDP LLVSEAERLV SEAAKKHGFF LVTNHGVDER
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
Arabidopsis Description
GA20OX4Gibberellin 20 oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C955]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.