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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05017 Canola cytosol, nucleus, peroxisome 94.72 94.72
CDX70015 Canola cytosol, nucleus, peroxisome 90.24 90.24
CDX81038 Canola cytosol, nucleus, peroxisome 88.65 88.89
CDX98998 Canola cytosol, nucleus, peroxisome 88.65 88.65
CDY58871 Canola cytosol, endoplasmic reticulum, peroxisome 87.07 87.3
AT5G07200.1 Thale cress cytosol, nucleus, peroxisome 85.75 85.53
CDY64867 Canola cytosol 67.81 68.72
CDY00263 Canola cytosol, nucleus, peroxisome 48.81 66.31
CDY72226 Canola mitochondrion 44.85 65.64
CDY64866 Canola cytosol, nucleus, peroxisome 53.56 65.48
CDY12880 Canola cytosol, nucleus, vacuole 72.03 64.54
CDY60083 Canola vacuole 68.07 64.18
CDY44829 Canola cytosol 65.96 63.94
CDY49714 Canola cytosol, nucleus, peroxisome 58.05 62.86
CDY52529 Canola cytosol, nucleus, peroxisome 61.74 61.42
CDY13228 Canola cytosol 11.87 60.81
CDY27101 Canola cytosol, nucleus, peroxisome 60.42 60.74
CDX91609 Canola cytosol, nucleus, peroxisome 60.16 60.32
CDX99892 Canola cytosol, nucleus, peroxisome 59.89 59.89
CDY00499 Canola cytosol, nucleus, peroxisome 59.89 59.74
CDX99893 Canola cytosol, nucleus, peroxisome 59.89 59.74
CDY55723 Canola cytosol, nucleus, peroxisome 58.84 59.31
VIT_15s0048g01320.t01 Wine grape cytosol 59.63 58.85
PGSC0003DMT400000036 Potato cytosol 56.46 58.63
CDX94446 Canola cytosol, nucleus, peroxisome 58.05 58.51
CDX92707 Canola cytosol, nucleus, peroxisome 59.1 58.49
Solyc01g093980.2.1 Tomato cytosol 55.94 58.24
GSMUA_Achr8P19120_001 Banana cytosol, extracellular, peroxisome 47.23 58.12
GSMUA_Achr2P01010_001 Banana cytosol, peroxisome, plastid 47.49 57.51
KRH65199 Soybean cytosol 56.99 56.54
HORVU5Hr1G124120.1 Barley cytosol 53.56 56.39
TraesCS5D01G566200.1 Wheat cytosol, peroxisome, plastid 53.56 56.23
TraesCS4A01G319100.1 Wheat cytosol, peroxisome, plastid 53.03 55.07
TraesCS5B01G560300.1 Wheat cytosol, peroxisome, plastid 53.3 55.04
KRH48309 Soybean cytosol 57.26 54.8
EER90481 Sorghum cytosol 53.83 53.83
GSMUA_AchrUn_... Banana cytosol 44.59 52.32
Os03t0856700-02 Rice cytosol, mitochondrion 51.19 52.15
CDY13227 Canola cytosol 23.48 52.05
TraesCS3D01G393900.1 Wheat cytosol 48.02 51.12
TraesCS3A01G399800.1 Wheat cytosol 48.02 50.84
TraesCS3B01G432800.1 Wheat cytosol 47.49 50.0
HORVU3Hr1G089980.2 Barley cytosol 46.97 49.86
TraesCS3D01G394000.1 Wheat cytosol, peroxisome, plastid 46.97 49.58
Os07t0169700-01 Rice plasma membrane 47.76 49.32
Zm00001d034898_P001 Maize plastid 52.24 49.01
CDY71240 Canola cytosol, peroxisome, plastid 32.98 46.82
EER95912 Sorghum cytosol 45.12 44.76
Zm00001d007894_P001 Maize cytosol 45.12 43.4
CDY70184 Canola cytosol 34.83 40.49
CDY69351 Canola cytosol, peroxisome 19.26 32.3
CDY36334 Canola cytosol 10.29 31.97
CDX92296 Canola cytosol, nucleus, peroxisome 27.44 29.8
CDX99288 Canola cytosol 27.18 29.26
CDX82317 Canola cytosol 27.18 29.18
CDX82318 Canola cytosol 27.18 29.18
CDY22995 Canola cytosol 27.18 29.18
CDY22994 Canola cytosol 27.18 29.18
CDX92294 Canola cytosol 26.91 28.98
CDX99287 Canola cytoskeleton, cytosol, peroxisome 26.39 28.74
Protein Annotations
MapMan:11.6.1.5Gene3D:2.60.120.330GO:A0A078FMG7UniProt:A0A078FMG7EnsemblPlants:CDY14054ProteinID:CDY14054
ProteinID:CDY14054.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00078585001InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PRINTS:PR00682
PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF140SUPFAM:SSF51197UniParc:UPI0001EED085SEG:seg
Description
BnaC02g01710DBnaC02g01710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMG7]
Coordinates
chrLK032040:+:208974..210996
Molecular Weight (calculated)
43633.8 Da
IEP (calculated)
6.294
GRAVY (calculated)
-0.498
Length
379 amino acids
Sequence
(BLAST)
001: MAMECITALP QRFSENKTKE DPSIFDANLL NQQSNHIPQQ FVWPDHEKPS SDVQPLQVPL VDLAGFLSGD PFLVSEATRL VSEASKKHGF FLVTNHGVDE
101: TLLSRAHLFM DSFFKAPACE KQKARRKWGE SSGYASSFVG RYSSKLPWKE TLSFKFSPEE KCHSQNIKDF VSEKMGDGYD DFGKVYQEYA EAMNILSLKI
201: MELLGMCLGI ERRHFRDFFE DNESILRLNY YPQCKQPELA LGTGPHCDPT SLTILHQDQV DGLEVFVDNK WQSIPPNPQS VVVNIGDTFM ALTNGIYKSC
301: LHRAVVNSEK DRKTLAFFLC PKKDKVVKPP EELVRVMSGE REYPDFTWSM FLEFTQKHYR SDMNTLEEFS NWLKNRRSF
Best Arabidopsis Sequence Match ( AT5G07200.1 )
(BLAST)
001: MATECIATVP QIFSENKTKE DSSIFDAKLL NQHSHHIPQQ FVWPDHEKPS TDVQPLQVPL IDLAGFLSGD SCLASEATRL VSKAATKHGF FLITNHGVDE
101: SLLSRAYLHM DSFFKAPACE KQKAQRKWGE SSGYASSFVG RFSSKLPWKE TLSFKFSPEE KIHSQTVKDF VSKKMGDGYE DFGKVYQEYA EAMNTLSLKI
201: MELLGMSLGV ERRYFKEFFE DSDSIFRLNY YPQCKQPELA LGTGPHCDPT SLTILHQDQV GGLQVFVDNK WQSIPPNPHA FVVNIGDTFM ALTNGRYKSC
301: LHRAVVNSER ERKTFAFFLC PKGEKVVKPP EELVNGVKSG ERKYPDFTWS MFLEFTQKHY RADMNTLDEF SIWLKNRRSF
Arabidopsis Description
GA20OX3Gibberellin 20 oxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q39112]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.