Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71240 | Canola | cytosol, peroxisome, plastid | 86.89 | 39.7 |
| CDY70184 | Canola | cytosol | 89.34 | 33.44 |
| Bra014019.1-P | Field mustard | cytosol | 89.34 | 30.53 |
| CDY13227 | Canola | cytosol | 34.43 | 24.56 |
| AT1G44090.1 | Thale cress | mitochondrion | 74.59 | 23.64 |
| GSMUA_Achr4P16380_001 | Banana | cytosol | 42.62 | 13.65 |
| GSMUA_Achr8P32560_001 | Banana | cytosol, nucleus, peroxisome | 34.43 | 12.88 |
| GSMUA_Achr11P... | Banana | cytosol | 39.34 | 12.73 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 31.97 | 12.58 |
| GSMUA_Achr6P25910_001 | Banana | cytosol | 31.15 | 12.06 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 31.97 | 11.96 |
| VIT_04s0044g01650.t01 | Wine grape | cytosol | 36.89 | 11.94 |
| VIT_18s0001g01390.t01 | Wine grape | cytosol | 36.07 | 11.64 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 36.07 | 11.64 |
| VIT_04s0044g01520.t01 | Wine grape | cytosol | 35.25 | 11.47 |
| KRH18058 | Soybean | cytosol | 35.25 | 11.47 |
| Zm00001d042611_P001 | Maize | cytosol | 36.07 | 11.4 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 34.43 | 11.11 |
| KRH53918 | Soybean | cytosol, nucleus, peroxisome | 34.43 | 11.08 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 34.43 | 11.02 |
| Solyc11g013360.1.1 | Tomato | cytosol | 31.15 | 11.01 |
| KRH16465 | Soybean | cytosol, nucleus, peroxisome | 33.61 | 10.9 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 33.61 | 10.82 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 33.61 | 10.82 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 33.61 | 10.82 |
| Os01t0883800-02 | Rice | cytosol | 34.43 | 10.8 |
| KRH64020 | Soybean | cytosol | 34.43 | 10.71 |
| KRH53327 | Soybean | cytosol | 31.15 | 10.38 |
| KRH64596 | Soybean | cytosol | 31.97 | 10.32 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 31.97 | 10.29 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 31.97 | 10.29 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 29.51 | 10.29 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 31.97 | 10.26 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 31.97 | 10.26 |
| CDY44829 | Canola | cytosol | 32.79 | 10.23 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 31.97 | 10.18 |
| CDY64867 | Canola | cytosol | 31.15 | 10.16 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 31.15 | 10.11 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 31.15 | 10.08 |
| HORVU3Hr1G090980.3 | Barley | plastid | 33.61 | 9.9 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 30.33 | 9.84 |
| Os05t0421900-00 | Rice | cytosol | 32.79 | 9.8 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 30.33 | 9.79 |
| TraesCS1A01G263600.1 | Wheat | cytosol | 31.97 | 9.77 |
| TraesCS1D01G263700.1 | Wheat | cytosol | 32.79 | 9.71 |
| CDY60083 | Canola | vacuole | 31.97 | 9.7 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 33.61 | 9.69 |
| TraesCS3A01G406200.1 | Wheat | plastid | 34.43 | 9.5 |
| OQU87995 | Sorghum | plastid | 34.43 | 9.5 |
| TraesCS3B01G439900.1 | Wheat | plastid | 32.79 | 9.5 |
| TraesCS1B01G274200.1 | Wheat | cytosol | 31.97 | 9.47 |
| TraesCS3D01G401400.1 | Wheat | plastid | 33.61 | 9.4 |
| HORVU1Hr1G063780.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 31.97 | 9.38 |
| Zm00001d012212_P001 | Maize | plastid | 35.25 | 9.29 |
| OQU78027 | Sorghum | cytosol | 32.79 | 8.03 |
| CDY22995 | Canola | cytosol | 20.49 | 7.08 |
| CDY22994 | Canola | cytosol | 20.49 | 7.08 |
| CDX82318 | Canola | cytosol | 20.49 | 7.08 |
| CDX82317 | Canola | cytosol | 20.49 | 7.08 |
| CDX99287 | Canola | cytoskeleton, cytosol, peroxisome | 19.67 | 6.9 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 19.67 | 6.88 |
| CDX92294 | Canola | cytosol | 19.67 | 6.82 |
| CDX99288 | Canola | cytosol | 19.67 | 6.82 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 9.02 | 3.94 |
| CDY72226 | Canola | mitochondrion | 4.92 | 2.32 |
| CDY69351 | Canola | cytosol, peroxisome | 0.0 | 0.0 |
| CDY13228 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY36334 | EnsemblPlantsGene:GSBRNA2T00060328001 | Gene3D:2.60.120.330 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR027443 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF368 | PFAM:PF14226 | ProteinID:CDY36334 | ProteinID:CDY36334.1 | SUPFAM:SSF51197 |
| UniParc:UPI0004EEDBE0 | UniProt:A0A078HFZ0 | MapMan:35.1 | : | : | : |
Description
BnaC08g05170DBnaC08g05170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFZ0]
Coordinates
chrLK032373:-:114495..114863
Molecular Weight (calculated)
13523.9 Da
IEP (calculated)
4.547
GRAVY (calculated)
-0.417
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSSDVNFSL LQSQPNIPPE FFWPENDLTP SEGDLNLPII DMSGFLNGDE AETQRAAKSV REACMTHGTF LVINHGFKSG MAEKTLDISS LFFGLPKDEK
101: LKAYRTPERP ALVSSNNLSK CE
101: LKAYRTPERP ALVSSNNLSK CE
001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
Arabidopsis Description
GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.