Factsheet for HORVU3Hr1G090980.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G439900.1	Wheat	plastid	95.41	93.82
TraesCS3D01G401400.1	Wheat	plastid	96.86	91.97
TraesCS3A01G406200.1	Wheat	plastid	95.41	89.37
Zm00001d042611_P001	Maize	cytosol	77.05	82.64
Os01t0883800-02	Rice	cytosol	75.36	80.21
OQU87995	Sorghum	plastid	80.19	75.11
Zm00001d012212_P001	Maize	plastid	77.78	69.55
GSMUA_Achr6P25910_001	Banana	cytosol	45.89	60.32
GSMUA_Achr4P16380_001	Banana	cytosol	55.07	59.84
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	46.62	59.2
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	46.38	58.9
VIT_18s0001g01390.t01	Wine grape	cytosol	48.31	52.91
HORVU5Hr1G124120.1	Barley	cytosol	45.65	52.5
GSMUA_Achr11P...	Banana	cytosol	47.34	51.99
HORVU1Hr1G063780.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	51.45	51.2
KRH53918	Soybean	cytosol, nucleus, peroxisome	46.86	51.19
KRH64020	Soybean	cytosol	48.31	51.02
HORVU3Hr1G089980.2	Barley	cytosol	43.96	50.98
KRH18058	Soybean	cytosol	45.41	50.13
KRH16465	Soybean	cytosol, nucleus, peroxisome	45.41	50.0
VIT_04s0044g01650.t01	Wine grape	cytosol	45.41	49.87
KRH53327	Soybean	cytosol	43.48	49.18
Bra014019.1-P	Field mustard	cytosol	41.79	48.46
KRH64596	Soybean	cytosol	43.48	47.62
Solyc11g013360.1.1	Tomato	cytosol	39.13	46.96
CDY71240	Canola	cytosol, peroxisome, plastid	30.19	46.82
AT1G44090.1	Thale cress	mitochondrion	42.51	45.71
VIT_04s0044g01520.t01	Wine grape	cytosol	38.41	42.4
CDY70184	Canola	cytosol	31.88	40.49
CDY36334	Canola	cytosol	9.9	33.61
HORVU4Hr1G013840.1	Barley	cytosol	26.33	28.31

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G090980
EnsemblPlants:HORVU3Hr1G090980.3	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0X2A6	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF129
SUPFAM:SSF51197	UniParc:UPI0002965773	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:634078038..634081600

Molecular Weight (calculated)

45310.0 Da

IEP (calculated)

8.701

GRAVY (calculated)

-0.260

Length

414 amino acids

Sequence
(BLAST)

001: MVLQTAQQEP SLTRPPRCSV ASAGSPAAMD TSPATPLLLQ PPAPSIDPSA AKAAVSKGGG AATAVYDLRR EPKIPAPFVW PHAEVRPTTA QELAVPVVDV
101: GVLRNGDAAG IRRAVAQVAS ACATHGFFQV SGHGVDNALA RAALDGASGF FRLPLAEKQR ARRIPGTVSG YTSAHADRFA SKLPWKETLS FGFHDRAGAA
201: APVVVDYFTS TLGPDYEPMG RVYQEYCGKM KELSLRIMEL LELSLGVEKR GYYRDFFADS SSIMRCNYYP PCPEPERTLG TGPHCDPTAL TILLQDDVGG
301: LEVLVDGDWR PVRPVPGAMV INIGDTFMAL SNGRYKSCLH RAVVNRRQER RSLAFFLCPR EDRVVRPPPS LRSPRQYPDF TWADLMRFTQ RHYRADTRTL
401: DAFTQWFSSA QEAA

Best Arabidopsis Sequence Match ( AT4G25420.1 )
(BLAST)

001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI

Arabidopsis Description

GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.