Factsheet for Os01t0883800-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042611_P001	Maize	cytosol	83.29	83.94
HORVU3Hr1G090980.3	Barley	plastid	80.21	75.36
TraesCS3B01G439900.1	Wheat	plastid	80.46	74.35
OQU87995	Sorghum	plastid	82.01	72.17
TraesCS3D01G401400.1	Wheat	plastid	80.72	72.02
TraesCS3A01G406200.1	Wheat	plastid	80.46	70.81
Zm00001d012212_P001	Maize	plastid	82.26	69.11
Os05t0421900-00	Rice	cytosol	66.58	63.48
GSMUA_Achr6P25910_001	Banana	cytosol	49.1	60.63
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	50.39	60.12
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	49.1	58.59
GSMUA_Achr4P16380_001	Banana	cytosol	57.07	58.27
VIT_18s0001g01390.t01	Wine grape	cytosol	50.64	52.12
GSMUA_Achr11P...	Banana	cytosol	49.61	51.19
KRH53918	Soybean	cytosol, nucleus, peroxisome	48.84	50.13
KRH16465	Soybean	cytosol, nucleus, peroxisome	48.33	50.0
KRH64020	Soybean	cytosol	50.39	50.0
KRH53327	Soybean	cytosol	47.04	50.0
Os07t0169700-01	Rice	plasma membrane	47.04	49.86
VIT_04s0044g01650.t01	Wine grape	cytosol	48.07	49.6
KRH18058	Soybean	cytosol	47.81	49.6
Bra014019.1-P	Field mustard	cytosol	44.47	48.46
KRH64596	Soybean	cytosol	47.04	48.41
Os03t0856700-02	Rice	cytosol, mitochondrion	46.27	48.39
CDY71240	Canola	cytosol, peroxisome, plastid	31.88	46.44
Solyc11g013360.1.1	Tomato	cytosol	40.62	45.8
AT1G44090.1	Thale cress	mitochondrion	44.47	44.94
VIT_04s0044g01520.t01	Wine grape	cytosol	42.67	44.27
CDY70184	Canola	cytosol	33.68	40.18
CDY36334	Canola	cytosol	10.8	34.43
Os03t0618300-01	Rice	cytosol	27.25	30.11
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	16.45	23.97

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	EntrezGene:4325003	ProteinID:AAL87949.1	EMBL:AB077025	ProteinID:AER45834.1
ProteinID:AER45835.1	ProteinID:AER45836.1	ProteinID:AER45837.1	ProteinID:AER45838.1	ProteinID:AER45839.1	ProteinID:AER45840.1
ProteinID:AER45841.1	ProteinID:AER45842.1	ProteinID:AER45881.1	ProteinID:AER45882.1	ProteinID:AER45897.1	ProteinID:AER45898.1
ProteinID:AER45899.1	ProteinID:AER45900.1	ProteinID:AER45901.1	ProteinID:AER45902.1	ProteinID:AER45903.1	ProteinID:AER45904.1
ProteinID:AER45906.1	ProteinID:AER45908.1	ProteinID:ALF35830.1	UniProt:B6F2D9	ProteinID:BAB90378.1	ProteinID:BAF06928.1
ProteinID:BAG80948.1	ProteinID:BAJ09474.1	ProteinID:BAJ09475.1	ProteinID:BAJ09476.1	ProteinID:BAK39015.1	ProteinID:BAK39016.1
ProteinID:BAK39017.1	ProteinID:BAK39018.1	ProteinID:BAK39019.1	ProteinID:BAK39020.1	ProteinID:BAK39021.1	ProteinID:BAK39022.1
ProteinID:BAK39023.1	ProteinID:BAK39024.1	ProteinID:BAK39025.1	ProteinID:BAK39026.1	ProteinID:BAK39027.1	ProteinID:BAK39028.1
ProteinID:BAK39029.1	ProteinID:BAK39030.1	ProteinID:BAK39031.1	ProteinID:BAK39032.1	ProteinID:BAK39048.1	ProteinID:BAS75582.1
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
EnsemblPlantsGene:Os01g0883800	EnsemblPlants:Os01t0883800-02	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF129	UniProt:Q0JH50	SUPFAM:SSF51197	UniParc:UPI00000ABE59
RefSeq:XP_015627721.1	SEG:seg	:	:	:	:

Description

SEMIDWARF 1Similar to GA C20oxidase2. (Os01t0883800-01);GA 20-oxidase2, GA metabolism (Os01t0883800-02)

Coordinates

chr1:+:38382466..38385208

Molecular Weight (calculated)

42515.4 Da

IEP (calculated)

6.010

GRAVY (calculated)

-0.248

Length

389 amino acids

Sequence
(BLAST)

001: MVAEHPTPPQ PHQPPPMDST AGSGIAAPAA AAVCDLRMEP KIPEPFVWPN GDARPASAAE LDMPVVDVGV LRDGDAEGLR RAAAQVAAAC ATHGFFQVSE
101: HGVDAALARA ALDGASDFFR LPLAEKRRAR RVPGTVSGYT SAHADRFASK LPWKETLSFG FHDRAAAPVV ADYFSSTLGP DFAPMGRVYQ KYCEEMKELS
201: LTIMELLELS LGVERGYYRE FFADSSSIMR CNYYPPCPEP ERTLGTGPHC DPTALTILLQ DDVGGLEVLV DGEWRPVSPV PGAMVINIGD TFMALSNGRY
301: KSCLHRAVVN QRRERRSLAF FLCPREDRVV RPPPSAATPQ HYPDFTWADL MRFTQRHYRA DTRTLDAFTR WLAPPAADAA ATAQVEAAS

Best Arabidopsis Sequence Match ( AT4G25420.1 )
(BLAST)

001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI

Arabidopsis Description

GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.