Factsheet for VIT_04s0044g01520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g01650.t01	Wine grape	cytosol	58.4	58.09
VIT_18s0001g01390.t01	Wine grape	cytosol	52.8	52.38
KRH53918	Soybean	cytosol, nucleus, peroxisome	52.0	51.45
KRH64020	Soybean	cytosol	53.6	51.28
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	44.27	50.92
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	44.27	50.92
GSMUA_Achr4P16380_001	Banana	cytosol	49.6	48.82
VIT_16s0022g02310.t01	Wine grape	cytosol	45.07	44.24
VIT_15s0048g01320.t01	Wine grape	cytosol	45.07	44.01
Bra014019.1-P	Field mustard	cytosol	41.07	43.14
Zm00001d042611_P001	Maize	cytosol	44.27	43.01
CDY71240	Canola	cytosol, peroxisome, plastid	30.4	42.7
Os01t0883800-02	Rice	cytosol	44.27	42.67
TraesCS1A01G263600.1	Wheat	cytosol	41.6	39.1
TraesCS1B01G274200.1	Wheat	cytosol	42.93	39.08
TraesCS1D01G263700.1	Wheat	cytosol	42.4	38.59
HORVU3Hr1G090980.3	Barley	plastid	42.4	38.41
TraesCS3B01G439900.1	Wheat	plastid	42.93	38.24
OQU87995	Sorghum	plastid	44.8	38.01
AT1G44090.1	Thale cress	mitochondrion	38.93	37.92
VIT_03s0063g01220.t01	Wine grape	cytosol	9.6	37.89
Zm00001d012212_P001	Maize	plastid	45.87	37.15
TraesCS3D01G401400.1	Wheat	plastid	42.67	36.7
TraesCS3A01G406200.1	Wheat	plastid	43.2	36.65
Os05t0421900-00	Rice	cytosol	39.73	36.52
CDY70184	Canola	cytosol	31.73	36.5
CDY36334	Canola	cytosol	11.47	35.25
HORVU1Hr1G063780.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	34.67	31.25
VIT_03s0063g01160.t01	Wine grape	cytosol	21.07	29.15
VIT_02s0234g00010.t01	Wine grape	cytosol	27.73	29.13
VIT_03s0063g01250.t01	Wine grape	cytosol	14.67	29.1
VIT_03s0063g01280.t01	Wine grape	cytosol	18.93	28.74
VIT_03s0063g01150.t01	Wine grape	cytosol	26.13	28.66
VIT_03s0063g01340.t01	Wine grape	cytosol	25.87	27.95
VIT_03s0063g01210.t01	Wine grape	cytosol	25.33	27.78
VIT_03s0063g01290.t01	Wine grape	cytosol	25.33	27.78
VIT_03s0063g01260.t01	Wine grape	cytosol	25.33	27.78
VIT_03s0063g01330.t01	Wine grape	cytosol	22.67	27.24
OQU78027	Sorghum	cytosol	34.13	25.7
VIT_03s0063g01180.t01	Wine grape	cytosol	25.6	24.43
VIT_03s0063g01310.t01	Wine grape	cytosol	26.4	16.78

Protein Annotations

EntrezGene:100249987	wikigene:100249987	MapMan:11.6.1.5	Gene3D:2.60.120.330	UniProt:A5AQS2	EMBL:AM432435
ProteinID:CAN80323	ProteinID:CAN80323.1	ProteinID:CBI37521	ProteinID:CBI37521.3	InterPro:DIOX_N	EMBL:FN596506
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100249987
wikigene:LOC100249987	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF368	SUPFAM:SSF51197	UniParc:UPI0001523C19	ArrayExpress:VIT_04s0044g01520	EnsemblPlantsGene:VIT_04s0044g01520
EnsemblPlants:VIT_04s0044g01520.t01	unigene:Vvi.22759	RefSeq:XP_002264802	RefSeq:XP_002264802.1	:	:

Description

No Description!

Coordinates

chr4:-:23110636..23112150

Molecular Weight (calculated)

42786.9 Da

IEP (calculated)

5.018

GRAVY (calculated)

-0.345

Length

375 amino acids

Sequence
(BLAST)

001: MASRTSTVVM APPSEEKHDV GFLVFDPKKM AKQELPKQFI WPNEDLVEAK EELNEPLVDM EGFLKGDEVA TAHAAELVRQ ACVTHGFFQV INHGVNPDIL
101: RATEVGLDPY FNLPMSRKLS MHKKVDELCG YCGAHSDRFA AKLTWKEMLT FEYHFKGDTD SEVADYFKNV VGEDFEETGW VFQRFCEAMK DLSLKIFKLL
201: AISLNLEDTS YCEKFFEDGF AVLRCNYYPV CPESGLTFGT GPHCDPTSLT ILHQDQVGGL EVFSNEKWYY VKPQPGALVI NIGDTLMALT NGIYKSCLHR
301: AAAKNDRDRI SFAYFISPRQ DKLVSPIKDL IAREGSKKYP DFKWEQLLDF TQVHDRTDDT TIKRFVEFLE SSETK

Best Arabidopsis Sequence Match ( AT5G51810.1 )
(BLAST)

001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI

Arabidopsis Description

GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.