CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042611_P001	Maize	cytosol	82.35	94.3
Zm00001d012212_P001	Maize	plastid	93.21	88.98
Os01t0883800-02	Rice	cytosol	72.17	82.01
HORVU3Hr1G090980.3	Barley	plastid	75.11	80.19
TraesCS3D01G401400.1	Wheat	plastid	76.92	77.98
TraesCS3B01G439900.1	Wheat	plastid	73.98	77.67
TraesCS3A01G406200.1	Wheat	plastid	76.7	76.7
GSMUA_Achr6P25910_001	Banana	cytosol	44.57	62.54
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	44.8	60.74
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	44.12	59.82
GSMUA_Achr4P16380_001	Banana	cytosol	51.13	59.32
EER90481	Sorghum	cytosol	45.48	53.03
GSMUA_Achr11P...	Banana	cytosol	45.02	52.79
VIT_18s0001g01390.t01	Wine grape	cytosol	45.02	52.65
KRH64020	Soybean	cytosol	45.48	51.28
KRH53918	Soybean	cytosol, nucleus, peroxisome	43.67	50.92
VIT_04s0044g01650.t01	Wine grape	cytosol	43.21	50.66
KRH16465	Soybean	cytosol, nucleus, peroxisome	42.99	50.53
KRH18058	Soybean	cytosol	42.76	50.4
KRH53327	Soybean	cytosol	41.18	49.73
Bra014019.1-P	Field mustard	cytosol	39.37	48.74
KRH64596	Soybean	cytosol	41.18	48.15
EER95912	Sorghum	cytosol	41.4	47.91
CDY71240	Canola	cytosol, peroxisome, plastid	28.51	47.19
Solyc11g013360.1.1	Tomato	cytosol	36.2	46.38
AT1G44090.1	Thale cress	mitochondrion	39.37	45.19
VIT_04s0044g01520.t01	Wine grape	cytosol	38.01	44.8
OQU78027	Sorghum	cytosol	48.19	42.77
CDY70184	Canola	cytosol	30.09	40.8
CDY36334	Canola	cytosol	9.5	34.43
EER91221	Sorghum	cytosol	24.89	32.07
KXG38014	Sorghum	cytosol	23.98	30.72
OQU91363	Sorghum	cytosol	24.43	30.34

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	UniProt:A0A1W0W0X0	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:OQU87995	ProteinID:OQU87995	ProteinID:OQU87995.1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF129	EnsemblPlantsGene:SORBI_3003G379500	SUPFAM:SSF51197	UniParc:UPI0009DC91FA	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:69335724..69340213

Molecular Weight (calculated)

48475.9 Da

IEP (calculated)

8.105

GRAVY (calculated)

-0.257

Length

442 amino acids

Sequence
(BLAST)

001: MRPRLPPNVP LSLLANSLSS PLPCTLAHLM VSQERQEPAL PLPSNSSSAK RAAASMDASS PAPPLLLRAP TPSPSIDLPA AAGKAAAVFD LRREPKIPAP
101: FLWPHEEARP TSAAELEVPV VDVGVLRNGD RAGLRRAAAQ VASACATHGF FQVCGHGVDA ALGRAALDGA SDFFRLPLAD KQRARRVPGT VSGYTSAHAD
201: RFASKLPWKE TLSFGFHDGA ASPVVVDYFT GTLGQDFEPM GRVYQRYCEK MKELSLTIME LLELSLGVER GYYREFFEDS RSIMRCNYYP PCPEPERTLG
301: TGPHCDPTAL TILLQDDVGG LEVLVDGEWR PVRPVPGAMV INIGDTFMAL SNGRYKSCLH RAVVNQRQER RSLAFFLCPR EDRVVRPPAS SATPRQYPDF
401: TWADLMRFTQ RHYRADTRTL DAFTRWLSHG PVPAQEAAAP CT

Best Arabidopsis Sequence Match ( AT4G25420.1 )
(BLAST)

001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI

Arabidopsis Description

GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.