CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033327_P001	Maize	cytosol	79.13	88.64
TraesCS4D01G079900.1	Wheat	cytosol	71.01	70.4
TraesCS4A01G234100.1	Wheat	cytosol	69.86	69.25
TraesCS4B01G081200.1	Wheat	cytosol	69.57	68.97
OQU91363	Sorghum	cytosol	70.72	68.54
Os03t0618300-01	Rice	cytosol	68.41	67.05
EER91221	Sorghum	cytosol	66.38	66.76
HORVU4Hr1G013840.1	Barley	cytosol	70.14	62.86
GSMUA_Achr7P08240_001	Banana	cytosol	55.07	60.51
GSMUA_Achr7P08230_001	Banana	cytosol	56.52	60.37
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	45.51	58.8
VIT_03s0063g01160.t01	Wine grape	cytosol	40.87	52.03
VIT_03s0063g01250.t01	Wine grape	cytosol	28.41	51.85
VIT_03s0063g01150.t01	Wine grape	cytosol	51.3	51.75
VIT_03s0063g01290.t01	Wine grape	cytosol	50.72	51.17
VIT_03s0063g01260.t01	Wine grape	cytosol	50.72	51.17
VIT_03s0063g01210.t01	Wine grape	cytosol	50.43	50.88
VIT_03s0063g01330.t01	Wine grape	cytosol	45.51	50.32
Solyc01g108880.2.1	Tomato	cytosol, extracellular	51.01	50.29
VIT_03s0063g01340.t01	Wine grape	cytosol	50.14	49.86
PGSC0003DMT400066716	Potato	cytosol	51.01	49.72
KRH49793	Soybean	cytosol	48.99	49.27
VIT_03s0063g01280.t01	Wine grape	cytosol	34.2	47.77
AT3G19000.1	Thale cress	cytoskeleton, cytosol, peroxisome	48.7	47.73
KRG89226	Soybean	cytosol	50.14	47.53
Bra022378.1-P	Field mustard	cytosol	47.54	46.99
Bra022377.1-P	Field mustard	cytosol	47.83	46.88
CDX99288	Canola	cytosol	47.83	46.88
CDX92296	Canola	cytosol, nucleus, peroxisome	47.25	46.7
CDX99287	Canola	cytoskeleton, cytosol, peroxisome	46.96	46.55
CDX92294	Canola	cytosol	47.25	46.31
CDY69351	Canola	cytosol, peroxisome	30.14	46.02
CDX82318	Canola	cytosol	46.96	45.89
CDY22995	Canola	cytosol	46.96	45.89
CDX82317	Canola	cytosol	46.67	45.61
CDY22994	Canola	cytosol	46.67	45.61
Solyc01g108860.2.1	Tomato	cytosol	46.38	45.58
AT3G19010.1	Thale cress	cytoskeleton, cytosol, peroxisome	46.09	45.56
VIT_03s0063g01180.t01	Wine grape	cytosol	51.3	45.04
PGSC0003DMT400066714	Potato	cytosol	45.8	45.01
PGSC0003DMT400066712	Potato	cytosol	18.26	39.87
VIT_03s0063g01310.t01	Wine grape	cytosol	50.14	29.32
EER90481	Sorghum	cytosol	30.72	27.97
EER95912	Sorghum	cytosol	29.28	26.44
Bra001729.1-P	Field mustard	nucleus	41.45	24.78
OQU87995	Sorghum	plastid	30.72	23.98
OQU78027	Sorghum	cytosol	25.51	17.67

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1B6QJC4	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KXG38014	ProteinID:KXG38014
ProteinID:KXG38014.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF98	EnsemblPlantsGene:SORBI_3001G166500	SUPFAM:SSF51197	UniParc:UPI00081AE237	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:13841944..13843504

Molecular Weight (calculated)

38489.4 Da

IEP (calculated)

5.303

GRAVY (calculated)

-0.319

Length

345 amino acids

Sequence
(BLAST)

001: MDDAFVQATE HRPVSPIAQA TGVPVIDLSA LAGSTPGAVD ALAAEVGAAC RDWGFFVAVG HGVPEATVAR AVEAGRAFFA LPPELKAAVR RTERAPLGYY
101: DAEHTKNVRD WKEVFDFFPH ELPSAAPDDE LVFVNKWPDD ADLPGLRAAL EEYAAAMEEL ALKLLELIAR SLHLAPNRLH GFFGDGQTTT YLRMNRYRPC
201: PRPDLALGLG RHKDSGALTI LRQDDDVGGL DVRRRTDGAW VRVEPVRGSF VVNVGDVVQV WSNDRYESVE HRASVNSEKE RFSIPYFFNP AMATLVEPLE
301: EMVGEENPSR YDAYSWGEFF RIRRRSNFSK LDVDNIQIAQ LRKHK

Best Arabidopsis Sequence Match ( AT3G19000.1 )
(BLAST)

001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.