Factsheet for PGSC0003DMT400066714

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400066712	Potato	cytosol	45.01	100.0
Solyc01g108860.2.1	Tomato	cytosol	91.74	91.74
VIT_03s0063g01280.t01	Wine grape	cytosol	47.29	67.21
VIT_03s0063g01210.t01	Wine grape	cytosol	62.68	64.33
VIT_03s0063g01150.t01	Wine grape	cytosol	62.68	64.33
VIT_03s0063g01330.t01	Wine grape	cytosol	55.84	62.82
VIT_03s0063g01260.t01	Wine grape	cytosol	60.97	62.57
VIT_03s0063g01160.t01	Wine grape	cytosol	47.58	61.62
VIT_03s0063g01290.t01	Wine grape	cytosol	59.26	60.82
PGSC0003DMT400066716	Potato	cytosol	57.83	57.34
VIT_03s0063g01250.t01	Wine grape	cytosol	30.77	57.14
GSMUA_Achr7P08240_001	Banana	cytosol	49.0	54.78
VIT_03s0063g01180.t01	Wine grape	cytosol	61.25	54.71
GSMUA_Achr7P08230_001	Banana	cytosol	48.43	52.63
Os03t0618300-01	Rice	cytosol	48.15	48.01
OQU91363	Sorghum	cytosol	47.86	47.19
TraesCS4B01G081200.1	Wheat	cytosol	46.72	47.13
TraesCS4D01G079900.1	Wheat	cytosol	46.44	46.84
TraesCS4A01G234100.1	Wheat	cytosol	46.44	46.84
Zm00001d033327_P001	Maize	cytosol	41.03	46.75
KXG38014	Sorghum	cytosol	45.01	45.8
EER91221	Sorghum	cytosol	43.3	44.31
HORVU4Hr1G013840.1	Barley	cytosol	47.29	43.12
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	30.77	40.45
Zm00001d013725_P002	Maize	cytosol	41.03	38.81
VIT_03s0063g01310.t01	Wine grape	cytosol	59.83	35.59
PGSC0003DMT400090419	Potato	cytosol	16.81	30.57
PGSC0003DMT400086432	Potato	cytosol	13.39	30.13
PGSC0003DMT400091205	Potato	cytosol, nucleus, peroxisome	13.39	29.75
PGSC0003DMT400036523	Potato	cytosol	25.64	28.94
PGSC0003DMT400092587	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	12.82	27.95
PGSC0003DMT400000036	Potato	cytosol	28.77	27.67
PGSC0003DMT400062314	Potato	cytosol	29.06	26.98
PGSC0003DMT400042644	Potato	cytosol	25.07	26.19
PGSC0003DMT400071866	Potato	cytosol	27.35	25.6
PGSC0003DMT400088528	Potato	cytosol, peroxisome, plastid	9.4	25.58
PGSC0003DMT400090397	Potato	cytosol	27.07	25.47
PGSC0003DMT400086504	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	7.69	23.89
PGSC0003DMT400097234	Potato	cytosol, mitochondrion, plastid	8.55	23.81
PGSC0003DMT400088638	Potato	cytosol	16.81	23.32
PGSC0003DMT400090198	Potato	mitochondrion	5.41	21.11
PGSC0003DMT400091526	Potato	cytosol	13.96	20.5
PGSC0003DMT400089703	Potato	nucleus	5.98	14.0

Protein Annotations

EntrezGene:102589984	Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M1CG17	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG402025923	PGSC:PGSC0003DMG402025923	EnsemblPlants:PGSC0003DMT400066714	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF98	SUPFAM:SSF51197	UniParc:UPI0002955AF4	RefSeq:XP_006346491.1	:

Description

2-oxoglutarate-dependent dioxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG402025923]

Coordinates

chr1:-:85226599..85228183

Molecular Weight (calculated)

40603.4 Da

IEP (calculated)

6.652

GRAVY (calculated)

-0.577

Length

351 amino acids

Sequence
(BLAST)

001: MVIVHPAIIQ DVEHRPKLTK TEAEGIPVID LSILNCPYTS TTDAELESLV AEIRNACKKW GFFQVINHGV SLECREKIEL ASRKFFGLPK EEKIKVKRNE
101: VNFMGYYDTE LTKKIRDWKE VFDFTVEKTA MVPLSQDPND KELREFHNQW PQYPPGLREV CEEYIQQMQK LAYKLAEVIS LSLSLPAKRL NEFFEDQVAF
201: GRINHYPPCP VPHLALGVGR HKDAGLFTIL SQDDTGGLEI KRKTDGEWIG VKPTPDAYIV NLGDATQVYS NGEYESVEHR VVLNTERSRF SIPFFVNPSH
301: STWIQPLEEK VNEKNPAKYK AYNWGMLYTH RRKHDPKTRD EENLPVDHFK A

Best Arabidopsis Sequence Match ( AT3G19000.1 )
(BLAST)

001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.