Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU91363 | Sorghum | cytosol | 63.61 | 66.29 |
| TraesCS4B01G081200.1 | Wheat | cytosol | 61.46 | 65.52 |
| TraesCS4D01G079900.1 | Wheat | cytosol | 61.19 | 65.23 |
| TraesCS4A01G234100.1 | Wheat | cytosol | 60.65 | 64.66 |
| Os03t0618300-01 | Rice | cytosol | 60.38 | 63.64 |
| HORVU4Hr1G013840.1 | Barley | cytosol | 60.38 | 58.18 |
| Zm00001d033327_P001 | Maize | cytosol | 47.71 | 57.47 |
| VIT_03s0063g01280.t01 | Wine grape | cytosol | 37.2 | 55.87 |
| GSMUA_Achr7P08240_001 | Banana | cytosol | 46.63 | 55.1 |
| GSMUA_Achr7P08230_001 | Banana | cytosol | 46.63 | 53.56 |
| VIT_03s0063g01150.t01 | Wine grape | cytosol | 44.47 | 48.25 |
| VIT_03s0063g01330.t01 | Wine grape | cytosol | 40.43 | 48.08 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 34.5 | 47.94 |
| VIT_03s0063g01210.t01 | Wine grape | cytosol | 43.67 | 47.37 |
| VIT_03s0063g01260.t01 | Wine grape | cytosol | 43.13 | 46.78 |
| VIT_03s0063g01340.t01 | Wine grape | cytosol | 43.4 | 46.4 |
| VIT_03s0063g01160.t01 | Wine grape | cytosol | 33.42 | 45.76 |
| VIT_03s0063g01290.t01 | Wine grape | cytosol | 41.24 | 44.74 |
| Solyc01g108880.2.1 | Tomato | cytosol, extracellular | 41.24 | 43.71 |
| PGSC0003DMT400066716 | Potato | cytosol | 41.51 | 43.5 |
| KRH49793 | Soybean | cytosol | 39.89 | 43.15 |
| CDY22994 | Canola | cytosol | 40.97 | 43.06 |
| CDY22995 | Canola | cytosol | 40.97 | 43.06 |
| CDX82318 | Canola | cytosol | 40.97 | 43.06 |
| CDX82317 | Canola | cytosol | 40.97 | 43.06 |
| CDX99288 | Canola | cytosol | 40.43 | 42.61 |
| Bra022377.1-P | Field mustard | cytosol | 40.43 | 42.61 |
| PGSC0003DMT400066712 | Potato | cytosol | 18.06 | 42.41 |
| CDX92294 | Canola | cytosol | 40.16 | 42.33 |
| VIT_03s0063g01250.t01 | Wine grape | cytosol | 21.56 | 42.33 |
| AT3G19000.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 39.89 | 42.05 |
| KRG89226 | Soybean | cytosol | 40.7 | 41.48 |
| VIT_03s0063g01180.t01 | Wine grape | cytosol | 43.94 | 41.48 |
| PGSC0003DMT400066714 | Potato | cytosol | 38.81 | 41.03 |
| Solyc01g108860.2.1 | Tomato | cytosol | 38.54 | 40.74 |
| Bra022378.1-P | Field mustard | cytosol | 38.27 | 40.69 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 38.01 | 40.4 |
| CDX99287 | Canola | cytoskeleton, cytosol, peroxisome | 37.74 | 40.23 |
| AT3G19010.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 37.47 | 39.83 |
| CDY69351 | Canola | cytosol, peroxisome | 22.64 | 37.17 |
| VIT_03s0063g01310.t01 | Wine grape | cytosol | 42.59 | 26.78 |
| Bra001729.1-P | Field mustard | nucleus | 39.62 | 25.48 |
| Zm00001d007894_P001 | Maize | cytosol | 25.88 | 24.37 |
| Zm00001d042611_P001 | Maize | cytosol | 25.07 | 24.09 |
| Zm00001d034898_P001 | Maize | plastid | 23.72 | 21.78 |
| Zm00001d012212_P001 | Maize | plastid | 24.53 | 19.65 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | UniProt:A0A1D6GLQ3 | ProteinID:AQK64241.1 | InterPro:DIOX_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF98 | SUPFAM:SSF51197 |
| UniParc:UPI000844508F | EnsemblPlantsGene:Zm00001d013725 | EnsemblPlants:Zm00001d013725_P002 | EnsemblPlants:Zm00001d013725_T002 | SEG:seg | : |
Description
gibberellin 20-oxidase4 gibberellin 20-oxidase4
Coordinates
chr5:+:18632040..18633504
Molecular Weight (calculated)
40586.0 Da
IEP (calculated)
5.594
GRAVY (calculated)
-0.396
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGLTMDQAF VQAPEHRPKP IVTEATGIPL IDLSPLAASG GAVDALAAEV GAASRDWGFF VVVGHGVPAE TVARATEAQR AFFALPAERK AAVRRNEAEP
101: LGYYESEHTK NVRDWKEVYD LVPREPPPPA AVADGELVFD NKWPQDLPGF REALEEYAKA MEELAFKLLE LIARSLKLRP DRLHGFFKDQ TTFIRLNHYP
201: PCPSPDLALG VGRHKDAGAL TILYQDDVGG LDVRRRSDGE WVRVRPVPDS FIINVGDLIQ VRERGAPGVG ELGEGEVLHA LLLQPGDLHH GGAGGGAGEQ
301: GRSAQVRRLQ LGRLLQHQEE QQLQEAQRGE HSDRAFQEEP RPRLTTATAR IHAIAMSSSD SEHAMSSLAS W
101: LGYYESEHTK NVRDWKEVYD LVPREPPPPA AVADGELVFD NKWPQDLPGF REALEEYAKA MEELAFKLLE LIARSLKLRP DRLHGFFKDQ TTFIRLNHYP
201: PCPSPDLALG VGRHKDAGAL TILYQDDVGG LDVRRRSDGE WVRVRPVPDS FIINVGDLIQ VRERGAPGVG ELGEGEVLHA LLLQPGDLHH GGAGGGAGEQ
301: GRSAQVRRLQ LGRLLQHQEE QQLQEAQRGE HSDRAFQEEP RPRLTTATAR IHAIAMSSSD SEHAMSSLAS W
001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVN VDFRLKTN
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVN VDFRLKTN
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.