Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92294 | Canola | cytosol | 86.93 | 86.93 |
| CDX99288 | Canola | cytosol | 86.93 | 86.93 |
| Bra022377.1-P | Field mustard | cytosol | 86.36 | 86.36 |
| VIT_03s0063g01340.t01 | Wine grape | cytosol | 61.65 | 62.54 |
| AT3G19010.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 61.08 | 61.6 |
| KRH49793 | Soybean | cytosol | 59.38 | 60.93 |
| KRG89226 | Soybean | cytosol | 60.51 | 58.52 |
| GSMUA_Achr7P08240_001 | Banana | cytosol | 51.42 | 57.64 |
| GSMUA_Achr7P08230_001 | Banana | cytosol | 52.56 | 57.28 |
| Os03t0618300-01 | Rice | cytosol | 53.69 | 53.69 |
| TraesCS4B01G081200.1 | Wheat | cytosol | 52.56 | 53.16 |
| TraesCS4A01G234100.1 | Wheat | cytosol | 52.27 | 52.87 |
| TraesCS4D01G079900.1 | Wheat | cytosol | 51.99 | 52.59 |
| OQU91363 | Sorghum | cytosol | 51.7 | 51.12 |
| EER91221 | Sorghum | cytosol | 49.15 | 50.44 |
| Zm00001d033327_P001 | Maize | cytosol | 44.03 | 50.32 |
| KXG38014 | Sorghum | cytosol | 47.73 | 48.7 |
| HORVU4Hr1G013840.1 | Barley | cytosol | 53.12 | 48.57 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 35.23 | 46.44 |
| Zm00001d013725_P002 | Maize | cytosol | 42.05 | 39.89 |
| AT1G60980.1 | Thale cress | cytosol, mitochondrion, peroxisome | 28.98 | 27.13 |
| AT5G07200.1 | Thale cress | cytosol, nucleus, peroxisome | 29.26 | 27.11 |
| AT4G25420.1 | Thale cress | cytosol, nucleus, peroxisome | 28.98 | 27.06 |
| AT1G44090.1 | Thale cress | mitochondrion | 29.55 | 27.01 |
| AT5G51810.1 | Thale cress | cytosol, nucleus, peroxisome | 28.41 | 26.45 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | EntrezGene:821433 | UniProt:A0A178VMV5 | ProteinID:AEE76179.1 | ArrayExpress:AT3G19000 |
| EnsemblPlantsGene:AT3G19000 | RefSeq:AT3G19000 | TAIR:AT3G19000 | RefSeq:AT3G19000-TAIR-G | EnsemblPlants:AT3G19000.1 | TAIR:AT3G19000.1 |
| EMBL:AY099808 | Unigene:At.27651 | Unigene:At.75342 | ProteinID:BAB01696.1 | EMBL:BT000306 | InterPro:DIOX_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | RefSeq:NP_566623.1 |
| ProteinID:OAP06443.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00682 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF127 | UniProt:Q9LJ66 | SUPFAM:SSF51197 | UniParc:UPI000004873C | : |
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
Coordinates
chr3:-:6553440..6555147
Molecular Weight (calculated)
40660.7 Da
IEP (calculated)
5.311
GRAVY (calculated)
-0.589
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.