Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- peroxisome 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71240 | Canola | cytosol, peroxisome, plastid | 59.74 | 86.14 |
| Bra014019.1-P | Field mustard | cytosol | 79.22 | 85.43 |
| CDY36334 | Canola | cytosol | 23.64 | 74.59 |
| CDY70184 | Canola | cytosol | 62.86 | 74.23 |
| GSMUA_Achr8P32560_001 | Banana | cytosol, nucleus, peroxisome | 42.6 | 50.31 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 42.34 | 50.0 |
| GSMUA_Achr6P25910_001 | Banana | cytosol | 39.74 | 48.57 |
| GSMUA_Achr4P16380_001 | Banana | cytosol | 47.79 | 48.29 |
| VIT_18s0001g01390.t01 | Wine grape | cytosol | 46.75 | 47.62 |
| VIT_04s0044g01650.t01 | Wine grape | cytosol | 45.19 | 46.15 |
| KRH18058 | Soybean | cytosol | 44.94 | 46.13 |
| Zm00001d042611_P001 | Maize | cytosol | 45.19 | 45.08 |
| AT5G07200.1 | Thale cress | cytosol, nucleus, peroxisome | 44.42 | 45.0 |
| KRH16465 | Soybean | cytosol, nucleus, peroxisome | 43.9 | 44.95 |
| AT4G25420.1 | Thale cress | cytosol, nucleus, peroxisome | 43.64 | 44.56 |
| Os01t0883800-02 | Rice | cytosol | 44.94 | 44.47 |
| KRH64020 | Soybean | cytosol | 45.19 | 44.39 |
| KRH53918 | Soybean | cytosol, nucleus, peroxisome | 43.38 | 44.06 |
| KRH53327 | Soybean | cytosol | 41.82 | 43.99 |
| GSMUA_Achr11P... | Banana | cytosol | 42.86 | 43.77 |
| KRH64596 | Soybean | cytosol | 42.34 | 43.12 |
| TraesCS1A01G263600.1 | Wheat | cytosol | 44.68 | 43.11 |
| Os05t0421900-00 | Rice | cytosol | 45.19 | 42.65 |
| HORVU3Hr1G090980.3 | Barley | plastid | 45.71 | 42.51 |
| AT5G51810.1 | Thale cress | cytosol, nucleus, peroxisome | 41.56 | 42.33 |
| AT1G60980.1 | Thale cress | cytosol, mitochondrion, peroxisome | 41.3 | 42.29 |
| TraesCS1B01G274200.1 | Wheat | cytosol | 44.94 | 41.99 |
| TraesCS1D01G263700.1 | Wheat | cytosol | 44.94 | 41.99 |
| TraesCS3B01G439900.1 | Wheat | plastid | 45.45 | 41.57 |
| Solyc11g013360.1.1 | Tomato | cytosol | 37.14 | 41.45 |
| TraesCS3D01G401400.1 | Wheat | plastid | 45.71 | 40.37 |
| TraesCS3A01G406200.1 | Wheat | plastid | 45.71 | 39.82 |
| OQU87995 | Sorghum | plastid | 45.19 | 39.37 |
| VIT_04s0044g01520.t01 | Wine grape | cytosol | 37.92 | 38.93 |
| Zm00001d012212_P001 | Maize | plastid | 44.68 | 37.15 |
| HORVU1Hr1G063780.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 34.55 | 31.97 |
| AT3G19000.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 27.01 | 29.55 |
| OQU78027 | Sorghum | cytosol | 37.92 | 29.32 |
| AT3G19010.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 24.94 | 27.51 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | EntrezGene:841012 | UniProt:A0A178WC38 | ProteinID:AAF79672.1 | ProteinID:AAG50546.1 |
| ProteinID:AEE32018.1 | ArrayExpress:AT1G44090 | EnsemblPlantsGene:AT1G44090 | RefSeq:AT1G44090 | TAIR:AT1G44090 | RefSeq:AT1G44090-TAIR-G |
| EnsemblPlants:AT1G44090.1 | TAIR:AT1G44090.1 | Symbol:ATGA20OX5 | Unigene:At.52030 | InterPro:DIOX_N | EMBL:DQ056484 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006629 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009416 |
| GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009686 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009791 |
| GO:GO:0009826 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016491 |
| GO:GO:0040007 | GO:GO:0045544 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | RefSeq:NP_175075.1 | ProteinID:OAP15654.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PO:PO:0000191 | PO:PO:0009001 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF368 |
| UniProt:Q4PT02 | SUPFAM:SSF51197 | UniParc:UPI0000163051 | : | : | : |
Description
GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
Coordinates
chr1:-:16760616..16762486
Molecular Weight (calculated)
43163.4 Da
IEP (calculated)
7.999
GRAVY (calculated)
-0.333
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.