Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64596 | Soybean | cytosol | 89.89 | 87.04 |
| KRH18058 | Soybean | cytosol | 72.95 | 71.2 |
| KRH16465 | Soybean | cytosol, nucleus, peroxisome | 71.86 | 69.95 |
| VIT_18s0001g01390.t01 | Wine grape | cytosol | 61.75 | 59.79 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 48.91 | 54.91 |
| GSMUA_Achr8P32560_001 | Banana | cytosol, nucleus, peroxisome | 48.09 | 53.99 |
| GSMUA_Achr4P16380_001 | Banana | cytosol | 55.74 | 53.54 |
| KRH64020 | Soybean | cytosol | 56.28 | 52.55 |
| KRH53918 | Soybean | cytosol, nucleus, peroxisome | 54.1 | 52.24 |
| KRH38652 | Soybean | cytosol | 52.19 | 50.0 |
| KRG91415 | Soybean | cytosol | 51.64 | 49.35 |
| Solyc11g013360.1.1 | Tomato | cytosol | 46.17 | 48.99 |
| KRH35405 | Soybean | cytosol | 47.54 | 47.67 |
| Zm00001d042611_P001 | Maize | cytosol | 49.73 | 47.15 |
| KRH65199 | Soybean | cytosol | 49.18 | 47.12 |
| Os01t0883800-02 | Rice | cytosol | 50.0 | 47.04 |
| KRH48309 | Soybean | cytosol | 50.0 | 46.21 |
| KRH09174 | Soybean | cytosol | 37.7 | 45.39 |
| Bra014019.1-P | Field mustard | cytosol | 42.62 | 43.7 |
| HORVU3Hr1G090980.3 | Barley | plastid | 49.18 | 43.48 |
| TraesCS1A01G263600.1 | Wheat | cytosol | 46.72 | 42.86 |
| TraesCS3B01G439900.1 | Wheat | plastid | 49.18 | 42.76 |
| CDY71240 | Canola | cytosol, peroxisome, plastid | 31.15 | 42.7 |
| AT1G44090.1 | Thale cress | mitochondrion | 43.99 | 41.82 |
| TraesCS1D01G263700.1 | Wheat | cytosol | 46.99 | 41.75 |
| TraesCS3D01G401400.1 | Wheat | plastid | 49.45 | 41.51 |
| TraesCS1B01G274200.1 | Wheat | cytosol | 46.72 | 41.5 |
| OQU87995 | Sorghum | plastid | 49.73 | 41.18 |
| TraesCS3A01G406200.1 | Wheat | plastid | 49.45 | 40.95 |
| Os05t0421900-00 | Rice | cytosol | 44.26 | 39.71 |
| Zm00001d012212_P001 | Maize | plastid | 49.18 | 38.88 |
| CDY70184 | Canola | cytosol | 32.51 | 36.5 |
| KRH50227 | Soybean | cytoskeleton, cytosol, peroxisome | 21.31 | 31.71 |
| CDY36334 | Canola | cytosol | 10.38 | 31.15 |
| HORVU1Hr1G063780.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 35.25 | 31.01 |
| KRH71198 | Soybean | cytosol | 29.23 | 30.4 |
| KRH71199 | Soybean | cytosol | 28.69 | 29.83 |
| KRH71196 | Soybean | cytosol | 28.69 | 29.83 |
| KRH50228 | Soybean | cytosol | 28.42 | 29.55 |
| KRH71201 | Soybean | cytosol | 28.14 | 29.26 |
| KRH50226 | Soybean | cytosol | 28.14 | 29.18 |
| KRH49793 | Soybean | cytosol | 26.78 | 28.57 |
| KRH49792 | Soybean | nucleus | 22.4 | 28.57 |
| OQU78027 | Sorghum | cytosol | 37.98 | 27.91 |
| KRG89226 | Soybean | cytosol | 27.6 | 27.75 |
| KRH71195 | Soybean | cytosol | 26.78 | 27.37 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | UniProt:A0A0R0JR20 | EMBL:ACUP02003459 | InterPro:DIOX_N | EnsemblPlantsGene:GLYMA_06G119100 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | EnsemblPlants:KRH53327 |
| ProteinID:KRH53327 | ProteinID:KRH53327.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF129 | SUPFAM:SSF51197 | UniParc:UPI0006EE1995 | : |
Description
hypothetical protein
Coordinates
chr6:+:9689732..9691834
Molecular Weight (calculated)
41836.1 Da
IEP (calculated)
7.621
GRAVY (calculated)
-0.323
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSGLLCSEL EVLHHVPTNF IWPKEYLVDA QHELQAPVVD LYGFLRGDNE PTKHAAKLIS EACSKHGFFQ VINHGVDPHL IREAHHQMDT FFKLPIHRKL
101: SVHKVPCSMW GYSGAHAHRF SSKLPWKETL SFPYHDNTSE PVVTNCFKST IGEDFEQAGN YYIIDIFQKY CGAMKQLGMK LIELLAISLG VDRLCYKDLF
201: EEGCSIMRCN NYPSCQQPSL TLGTGPHCDP TSLTILHQDH VGGLHVFADN RWQTVPPRLD AFVINIGDTF TALSNGRYKS CLHRAVVNKY KERKSLAFFL
301: CPKEDKLVRA PDDIVSMDGI KHYPDFTWSD LLHFTQKHYR ADQATLPNFI KWLQSSKTTQ TSQLLR
101: SVHKVPCSMW GYSGAHAHRF SSKLPWKETL SFPYHDNTSE PVVTNCFKST IGEDFEQAGN YYIIDIFQKY CGAMKQLGMK LIELLAISLG VDRLCYKDLF
201: EEGCSIMRCN NYPSCQQPSL TLGTGPHCDP TSLTILHQDH VGGLHVFADN RWQTVPPRLD AFVINIGDTF TALSNGRYKS CLHRAVVNKY KERKSLAFFL
301: CPKEDKLVRA PDDIVSMDGI KHYPDFTWSD LLHFTQKHYR ADQATLPNFI KWLQSSKTTQ TSQLLR
001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
Arabidopsis Description
GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.