Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35405 | Soybean | cytosol | 91.64 | 96.16 |
| KRH38652 | Soybean | cytosol | 80.16 | 80.37 |
| KRH09174 | Soybean | cytosol | 62.14 | 78.29 |
| VIT_16s0022g02310.t01 | Wine grape | cytosol | 73.37 | 73.56 |
| PGSC0003DMT400086432 | Potato | cytosol | 29.77 | 73.08 |
| Solyc03g006880.2.1 | Tomato | cytosol | 68.41 | 69.31 |
| PGSC0003DMT400036523 | Potato | cytosol | 56.14 | 69.13 |
| PGSC0003DMT400062314 | Potato | cytosol | 68.15 | 69.05 |
| PGSC0003DMT400092587 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 28.98 | 68.94 |
| PGSC0003DMT400071866 | Potato | cytosol | 66.58 | 68.0 |
| PGSC0003DMT400042644 | Potato | cytosol | 59.27 | 67.56 |
| PGSC0003DMT400090397 | Potato | cytosol | 65.27 | 67.02 |
| Solyc06g035530.2.1 | Tomato | cytosol | 65.01 | 66.94 |
| Solyc11g072310.1.1 | Tomato | cytosol | 65.8 | 66.49 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 62.4 | 66.2 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 62.14 | 66.11 |
| Solyc06g050110.1.1 | Tomato | cytosol | 62.4 | 65.84 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 61.88 | 64.93 |
| TraesCS5B01G560300.1 | Wheat | cytosol, peroxisome, plastid | 62.14 | 64.85 |
| Solyc09g009110.2.1 | Tomato | cytosol | 63.97 | 64.81 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 51.96 | 64.61 |
| PGSC0003DMT400091205 | Potato | cytosol, nucleus, peroxisome | 26.63 | 64.56 |
| PGSC0003DMT400090198 | Potato | mitochondrion | 15.14 | 64.44 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 52.22 | 63.9 |
| KRH65199 | Soybean | cytosol | 63.71 | 63.87 |
| KRH48309 | Soybean | cytosol | 64.23 | 62.12 |
| PGSC0003DMT400088528 | Potato | cytosol, peroxisome, plastid | 20.37 | 60.47 |
| EER90481 | Sorghum | cytosol | 59.79 | 60.42 |
| PGSC0003DMT400088638 | Potato | cytosol | 39.43 | 59.68 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 57.96 | 59.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.09 | 58.2 |
| Solyc10g045690.1.1 | Tomato | cytosol, nucleus, peroxisome | 28.72 | 57.89 |
| Zm00001d034898_P001 | Maize | plastid | 59.79 | 56.68 |
| PGSC0003DMT400091526 | Potato | cytosol | 34.73 | 55.65 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 51.44 | 55.34 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 50.91 | 54.47 |
| CDY13228 | Canola | cytosol | 10.44 | 54.05 |
| PGSC0003DMT400097234 | Potato | cytosol, mitochondrion, plastid | 17.75 | 53.97 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 50.39 | 53.76 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 50.13 | 53.33 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 49.61 | 53.22 |
| Os07t0169700-01 | Rice | plasma membrane | 50.13 | 52.32 |
| KRH53327 | Soybean | cytosol | 49.35 | 51.64 |
| KRH16465 | Soybean | cytosol, nucleus, peroxisome | 49.35 | 50.27 |
| KRH64596 | Soybean | cytosol | 49.61 | 50.26 |
| KRH18058 | Soybean | cytosol | 49.09 | 50.13 |
| KRH53918 | Soybean | cytosol, nucleus, peroxisome | 49.35 | 49.87 |
| KRH64020 | Soybean | cytosol | 50.91 | 49.74 |
| PGSC0003DMT400086504 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 14.62 | 49.56 |
| Solyc10g045770.1.1 | Tomato | cytosol | 14.1 | 49.54 |
| EER95912 | Sorghum | cytosol | 49.35 | 49.48 |
| Solyc10g046820.1.1 | Tomato | cytosol, nucleus, peroxisome | 24.54 | 47.72 |
| Zm00001d007894_P001 | Maize | cytosol | 48.56 | 47.21 |
| CDY13227 | Canola | cytosol | 20.89 | 46.78 |
| PGSC0003DMT400089703 | Potato | nucleus | 18.28 | 46.67 |
| KRH50228 | Soybean | cytosol | 29.5 | 32.1 |
| KRH71196 | Soybean | cytosol | 28.98 | 31.53 |
| KRH50226 | Soybean | cytosol | 28.2 | 30.59 |
| KRH71201 | Soybean | cytosol | 27.94 | 30.4 |
| KRH71198 | Soybean | cytosol | 27.68 | 30.11 |
| KRH49793 | Soybean | cytosol | 26.63 | 29.74 |
| KRH50227 | Soybean | cytoskeleton, cytosol, peroxisome | 19.06 | 29.67 |
| KRH71199 | Soybean | cytosol | 27.15 | 29.55 |
| KRH71195 | Soybean | cytosol | 27.15 | 29.05 |
| KRH49792 | Soybean | nucleus | 21.15 | 28.22 |
| KRG89226 | Soybean | cytosol | 26.63 | 28.02 |
Protein Annotations
| EntrezGene:100816992 | MapMan:11.6.1.5 | Gene3D:2.60.120.330 | EMBL:ACUP02012684 | InterPro:DIOX_N | EnsemblPlantsGene:GLYMA_20G153400 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006629 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009416 |
| GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009686 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009791 |
| GO:GO:0009826 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016491 |
| GO:GO:0040007 | GO:GO:0045544 | GO:GO:0046872 | GO:GO:0055114 | UniProt:I1NGN3 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | EnsemblPlants:KRG91415 | ProteinID:KRG91415 | ProteinID:KRG91415.1 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF140 |
| SUPFAM:SSF51197 | UniParc:UPI000233E35C | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:39230061..39232323
Molecular Weight (calculated)
43329.8 Da
IEP (calculated)
6.230
GRAVY (calculated)
-0.307
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDCITSIP MMPQAPPQET TKEQQEQQPL VFDASVLRHQ LHIPSQFIWP DEEKACLDEP ELLVPFIDLG GFLSGDPVAA AEASRLVGEA CQKHGFFLVV
101: NHGIDQRLIS DAHLYMEHFF GLPLSQKQRA QRKPGEHCGY ASSFTGRFSS KLPWKETLSF QYSADKNSSP TLVKDYLCSK MGNEFEQFGK VYQDYCDAMS
201: RLSLGIMELL GMSLGVGRAC FREFFEENSS IMRLNYYPPC QKPDLTLGTG PHCDPTSLTI LHQDQVGGLQ VCVDNEWHSI KPDFNAFVVN VGDTFMALSN
301: GRYKSCLHRA VVNSQTTRKS LAFFLCPRSD KVVSPPCELV DNLGPRLYPD FTWPMLLEFT QKHYRADMKT LEAFANWLQR KSN
101: NHGIDQRLIS DAHLYMEHFF GLPLSQKQRA QRKPGEHCGY ASSFTGRFSS KLPWKETLSF QYSADKNSSP TLVKDYLCSK MGNEFEQFGK VYQDYCDAMS
201: RLSLGIMELL GMSLGVGRAC FREFFEENSS IMRLNYYPPC QKPDLTLGTG PHCDPTSLTI LHQDQVGGLQ VCVDNEWHSI KPDFNAFVVN VGDTFMALSN
301: GRYKSCLHRA VVNSQTTRKS LAFFLCPRSD KVVSPPCELV DNLGPRLYPD FTWPMLLEFT QKHYRADMKT LEAFANWLQR KSN
001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI
Arabidopsis Description
GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.