Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G399800.1 | Wheat | cytosol | 89.36 | 89.11 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 88.8 | 89.04 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 89.36 | 88.61 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 89.08 | 88.58 |
| Os07t0169700-01 | Rice | plasma membrane | 74.79 | 72.75 |
| EER95912 | Sorghum | cytosol | 71.99 | 67.28 |
| Zm00001d007894_P001 | Maize | cytosol | 71.71 | 64.97 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 57.42 | 56.94 |
| PGSC0003DMT400086432 | Potato | cytosol | 24.65 | 56.41 |
| CDY72226 | Canola | mitochondrion | 40.34 | 55.6 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 47.9 | 55.52 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 47.06 | 53.67 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 50.98 | 52.0 |
| Bra019165.1-P | Field mustard | cytosol | 50.7 | 51.71 |
| PGSC0003DMT400062314 | Potato | cytosol | 54.34 | 51.32 |
| VIT_16s0022g02310.t01 | Wine grape | cytosol | 54.62 | 51.05 |
| Solyc01g093980.2.1 | Tomato | cytosol | 51.54 | 50.55 |
| Solyc03g006880.2.1 | Tomato | cytosol | 53.5 | 50.53 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.66 | 50.46 |
| PGSC0003DMT400000036 | Potato | cytosol | 51.26 | 50.14 |
| PGSC0003DMT400091205 | Potato | cytosol, nucleus, peroxisome | 22.13 | 50.0 |
| KRG91415 | Soybean | cytosol | 53.22 | 49.61 |
| PGSC0003DMT400036523 | Potato | cytosol | 43.14 | 49.52 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 38.66 | 49.46 |
| AT4G25420.1 | Thale cress | cytosol, nucleus, peroxisome | 52.1 | 49.34 |
| Bra022565.1-P | Field mustard | cytosol | 52.1 | 49.34 |
| KRH65199 | Soybean | cytosol | 52.66 | 49.21 |
| KRH38652 | Soybean | cytosol | 52.66 | 49.21 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 52.1 | 49.21 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 51.82 | 49.2 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 51.82 | 49.07 |
| PGSC0003DMT400092587 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 22.13 | 49.07 |
| Bra013890.1-P | Field mustard | cytosol | 51.54 | 48.94 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 51.54 | 48.94 |
| Solyc11g072310.1.1 | Tomato | cytosol | 51.82 | 48.81 |
| PGSC0003DMT400090397 | Potato | cytosol | 50.98 | 48.79 |
| CDY13228 | Canola | cytosol | 10.08 | 48.65 |
| PGSC0003DMT400071866 | Potato | cytosol | 50.98 | 48.53 |
| VIT_15s0048g01320.t01 | Wine grape | cytosol | 52.1 | 48.44 |
| Solyc06g035530.2.1 | Tomato | cytosol | 50.42 | 48.39 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 51.26 | 48.28 |
| PGSC0003DMT400042644 | Potato | cytosol | 45.38 | 48.21 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 51.26 | 48.16 |
| KRH48309 | Soybean | cytosol | 53.22 | 47.98 |
| Bra028277.1-P | Field mustard | cytosol, nucleus, peroxisome | 50.98 | 47.89 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 50.98 | 47.89 |
| AT5G51810.1 | Thale cress | cytosol, nucleus, peroxisome | 50.7 | 47.88 |
| KRH09174 | Soybean | cytosol | 40.62 | 47.7 |
| KRH35405 | Soybean | cytosol | 48.74 | 47.67 |
| Solyc09g009110.2.1 | Tomato | cytosol | 50.42 | 47.62 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 50.98 | 47.52 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 50.14 | 47.35 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 50.14 | 47.23 |
| Bra009285.1-P | Field mustard | cytosol | 50.14 | 47.23 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 50.14 | 47.23 |
| AT5G07200.1 | Thale cress | cytosol, nucleus, peroxisome | 50.14 | 47.11 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 49.86 | 46.97 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 49.58 | 46.83 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 49.3 | 46.44 |
| Bra005927.1-P | Field mustard | cytosol | 42.3 | 46.32 |
| Bra028706.1-P | Field mustard | cytosol | 49.02 | 46.17 |
| AT1G60980.1 | Thale cress | cytosol, mitochondrion, peroxisome | 48.46 | 46.01 |
| Solyc06g050110.1.1 | Tomato | cytosol | 46.22 | 45.45 |
| PGSC0003DMT400088638 | Potato | cytosol | 31.93 | 45.06 |
| Bra010064.1-P | Field mustard | cytosol | 47.34 | 44.83 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 47.62 | 44.62 |
| PGSC0003DMT400090198 | Potato | mitochondrion | 11.2 | 44.44 |
| Bra027106.1-P | Field mustard | cytosol | 46.5 | 44.15 |
| HORVU3Hr1G090980.3 | Barley | plastid | 50.98 | 43.96 |
| PGSC0003DMT400088528 | Potato | cytosol, peroxisome, plastid | 15.13 | 41.86 |
| Bra039251.1-P | Field mustard | cytosol | 43.7 | 41.71 |
| Bra031467.1-P | Field mustard | cytosol | 43.98 | 41.64 |
| CDY64867 | Canola | cytosol | 43.42 | 41.44 |
| PGSC0003DMT400091526 | Potato | cytosol | 27.73 | 41.42 |
| Solyc10g045770.1.1 | Tomato | cytosol | 12.61 | 41.28 |
| PGSC0003DMT400097234 | Potato | cytosol, mitochondrion, plastid | 14.57 | 41.27 |
| Solyc10g045690.1.1 | Tomato | cytosol, nucleus, peroxisome | 21.57 | 40.53 |
| PGSC0003DMT400086504 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 12.61 | 39.82 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 46.5 | 39.24 |
| CDY60083 | Canola | vacuole | 43.98 | 39.05 |
| CDY44829 | Canola | cytosol | 42.58 | 38.87 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 33.61 | 38.71 |
| CDY13227 | Canola | cytosol | 17.65 | 36.84 |
| PGSC0003DMT400089703 | Potato | nucleus | 14.85 | 35.33 |
| HORVU1Hr1G063780.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 39.5 | 33.89 |
| Solyc10g046820.1.1 | Tomato | cytosol, nucleus, peroxisome | 18.49 | 33.5 |
| HORVU4Hr1G013840.1 | Barley | cytosol | 31.37 | 29.09 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | UniProt:A0A287M7M4 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| EnsemblPlantsGene:HORVU3Hr1G089980 | EnsemblPlants:HORVU3Hr1G089980.2 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF118 |
| SUPFAM:SSF51197 | UniParc:UPI000B4737CE | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:630544796..630548068
Molecular Weight (calculated)
39450.0 Da
IEP (calculated)
6.084
GRAVY (calculated)
-0.094
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLVFDAAV LSRKEDIPPQ FIWPADEAPS VDGVEEIVVP VVDLAGFLAG DDAGLNELVA ACERHGFFQV VNHGVDPALL AKAYRCCDAF YALPLAEKQR
101: AQRRLGENHG YAGSFVGRFG SKLPWKETMS FNCSAAPESA RKVVDYFVGV LGEEYRHMGD VWQEYCNEMT RLALDVTEVL AACLGLDRGA LRGFFAGDDS
201: LMRLNHYPPC KKPHLTLGTG PHHDPTALTL LHQDDVGGLE VFTGGAWRAV RPRSDAFVVN IGDTFSALTN GRHVSCLHRA VVNGSLARRS LTFFLNPQLD
301: RPVTPPAELL AIDGRPRVYP DFTWREFLEF TQKHYRSDSR TLDAFVAWIK ILDGCGL
101: AQRRLGENHG YAGSFVGRFG SKLPWKETMS FNCSAAPESA RKVVDYFVGV LGEEYRHMGD VWQEYCNEMT RLALDVTEVL AACLGLDRGA LRGFFAGDDS
201: LMRLNHYPPC KKPHLTLGTG PHHDPTALTL LHQDDVGGLE VFTGGAWRAV RPRSDAFVVN IGDTFSALTN GRHVSCLHRA VVNGSLARRS LTFFLNPQLD
301: RPVTPPAELL AIDGRPRVYP DFTWREFLEF TQKHYRSDSR TLDAFVAWIK ILDGCGL
001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI
Arabidopsis Description
GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.