Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039251.1-P | Field mustard | cytosol | 90.05 | 96.79 |
| CDY64867 | Canola | cytosol | 90.05 | 96.79 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 72.64 | 94.19 |
| AT1G60980.1 | Thale cress | cytosol, mitochondrion, peroxisome | 69.15 | 73.94 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 73.88 | 70.21 |
| CDY44829 | Canola | cytosol | 67.16 | 69.05 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 64.18 | 68.07 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 63.93 | 67.99 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 63.93 | 67.81 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 63.68 | 67.55 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 63.43 | 67.46 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 62.94 | 66.75 |
| CDY72226 | Canola | mitochondrion | 38.06 | 59.07 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 40.05 | 57.71 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 49.5 | 56.86 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 42.04 | 54.87 |
| PGSC0003DMT400000036 | Potato | cytosol | 48.76 | 53.7 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 50.25 | 53.58 |
| Solyc01g093980.2.1 | Tomato | cytosol | 48.51 | 53.57 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 50.75 | 53.54 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 50.0 | 53.46 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 50.25 | 53.44 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 50.25 | 53.3 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 50.75 | 53.26 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 50.25 | 53.16 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 49.5 | 52.93 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 50.0 | 52.89 |
| VIT_15s0048g01320.t01 | Wine grape | cytosol | 50.0 | 52.34 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 40.3 | 51.76 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 46.27 | 51.52 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 46.02 | 51.39 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 46.02 | 50.68 |
| TraesCS5B01G560300.1 | Wheat | cytosol, peroxisome, plastid | 46.27 | 50.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.05 | 49.85 |
| KRH65199 | Soybean | cytosol | 47.26 | 49.74 |
| EER90481 | Sorghum | cytosol | 46.27 | 49.08 |
| CDY13228 | Canola | cytosol | 8.96 | 48.65 |
| KRH48309 | Soybean | cytosol | 47.51 | 48.23 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 43.78 | 47.31 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 40.55 | 45.79 |
| Zm00001d034898_P001 | Maize | plastid | 45.77 | 45.54 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 40.3 | 45.25 |
| CDY13227 | Canola | cytosol | 18.91 | 44.44 |
| Os07t0169700-01 | Rice | plasma membrane | 40.55 | 44.41 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 39.55 | 44.29 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 39.55 | 44.17 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 39.05 | 43.98 |
| CDY71240 | Canola | cytosol, peroxisome, plastid | 28.36 | 42.7 |
| EER95912 | Sorghum | cytosol | 39.05 | 41.1 |
| Zm00001d007894_P001 | Maize | cytosol | 38.81 | 39.59 |
| CDY70184 | Canola | cytosol | 30.1 | 37.12 |
| CDY36334 | Canola | cytosol | 9.7 | 31.97 |
| CDY69351 | Canola | cytosol, peroxisome | 17.66 | 31.42 |
| CDX99287 | Canola | cytoskeleton, cytosol, peroxisome | 25.62 | 29.6 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 25.62 | 29.51 |
| CDX82318 | Canola | cytosol | 24.88 | 28.33 |
| CDX82317 | Canola | cytosol | 24.88 | 28.33 |
| CDY22995 | Canola | cytosol | 24.88 | 28.33 |
| CDY22994 | Canola | cytosol | 24.88 | 28.33 |
| CDX92294 | Canola | cytosol | 23.88 | 27.27 |
| CDX99288 | Canola | cytosol | 23.88 | 27.27 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | GO:A0A078J8I2 | UniProt:A0A078J8I2 | EnsemblPlants:CDY60083 | ProteinID:CDY60083 |
| ProteinID:CDY60083.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00028142001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF140 | SUPFAM:SSF51197 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0004EBC0BB | SEG:seg | : | : | : | : |
Description
BnaCnng35700DBnaCnng35700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8I2]
Coordinates
chrLK033838:-:1295..2783
Molecular Weight (calculated)
46447.7 Da
IEP (calculated)
7.056
GRAVY (calculated)
-0.342
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRESLLLTL FLLFLFLSNI KHLFISVEME YITELSFNGQ KTEDNPLTLF GSTVINNQQN QIPQEFVWPE DKKPSANVPI LQIPLIDLAG VLSGDQFLVS
101: EATRLVAEGA KQHGFFLVTN HGVDEGLMSS ACTLMDSFFK SPTCEKQKAQ RNHDESWGYT SSFVGKFKKN LPWKEMLSFR FSPQEKSENH SQIVKDFIIK
201: KMGYGYNDFG SVYQEYAQAM SNLSLRIMEL LAMSLGIKRS HFVEFFEDNE SILRLNYYPK CKQPYDVLGS GPHCDPTSLT ILQQDNSGLQ VFVDNQWQSI
301: PYNPQALVVN IGDTFRALTN GRYKSCLHRA VVNSQTERKT LVFFLSPRMD KVVKPPEELE GERAYPDFTW SLLHEFVMKH YRTDENTLKE FTKWLKTRRI
401: FL
101: EATRLVAEGA KQHGFFLVTN HGVDEGLMSS ACTLMDSFFK SPTCEKQKAQ RNHDESWGYT SSFVGKFKKN LPWKEMLSFR FSPQEKSENH SQIVKDFIIK
201: KMGYGYNDFG SVYQEYAQAM SNLSLRIMEL LAMSLGIKRS HFVEFFEDNE SILRLNYYPK CKQPYDVLGS GPHCDPTSLT ILQQDNSGLQ VFVDNQWQSI
301: PYNPQALVVN IGDTFRALTN GRYKSCLHRA VVNSQTERKT LVFFLSPRMD KVVKPPEELE GERAYPDFTW SLLHEFVMKH YRTDENTLKE FTKWLKTRRI
401: FL
001: MECIIKLPQR FNKNKSKKNP LRIFDSTVLN HQPDHIPQEF VWPDHEKPSK NVPILQVPVI DLAGFLSNDP LLVSEAERLV SEAAKKHGFF LVTNHGVDER
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
Arabidopsis Description
GA20OX4Gibberellin 20 oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C955]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.