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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039251.1-P Field mustard cytosol 93.55 77.54
CDY64867 Canola cytosol 93.55 77.54
CDY60083 Canola vacuole 94.19 72.64
AT1G60980.1 Thale cress cytosol, mitochondrion, peroxisome 71.61 59.04
CDY44829 Canola cytosol 70.32 55.75
CDX70015 Canola cytosol, nucleus, peroxisome 66.13 54.09
CDX98998 Canola cytosol, nucleus, peroxisome 65.81 53.83
CDX81038 Canola cytosol, nucleus, peroxisome 65.48 53.7
CDY14054 Canola cytosol, nucleus, peroxisome 65.48 53.56
CDY58871 Canola cytosol, endoplasmic reticulum, peroxisome 65.16 53.44
CDY12880 Canola cytosol, nucleus, vacuole 72.58 53.19
CDY05017 Canola cytosol, nucleus, peroxisome 64.52 52.77
CDY13227 Canola cytosol 24.84 45.03
CDY49714 Canola cytosol, nucleus, peroxisome 50.0 44.29
CDY72226 Canola mitochondrion 36.45 43.63
GSMUA_Achr8P19120_001 Banana cytosol, extracellular, peroxisome 42.9 43.18
CDX91609 Canola cytosol, nucleus, peroxisome 52.58 43.12
PGSC0003DMT400000036 Potato cytosol 50.65 43.01
CDY00263 Canola cytosol, nucleus, peroxisome 38.71 43.01
CDY27101 Canola cytosol, nucleus, peroxisome 52.26 42.97
Solyc01g093980.2.1 Tomato cytosol 50.32 42.86
CDY71240 Canola cytosol, peroxisome, plastid 36.77 42.7
CDY52529 Canola cytosol, nucleus, peroxisome 52.26 42.52
CDX99892 Canola cytosol, nucleus, peroxisome 51.94 42.48
CDY00499 Canola cytosol, nucleus, peroxisome 51.94 42.37
CDX99893 Canola cytosol, nucleus, peroxisome 51.94 42.37
VIT_15s0048g01320.t01 Wine grape cytosol 51.29 41.41
GSMUA_Achr2P01010_001 Banana cytosol, peroxisome, plastid 41.61 41.21
CDX92707 Canola cytosol, nucleus, peroxisome 50.65 40.99
CDY55723 Canola cytosol, nucleus, peroxisome 49.68 40.96
CDX94446 Canola cytosol, nucleus, peroxisome 49.35 40.69
KRH65199 Soybean cytosol 49.35 40.05
HORVU5Hr1G124120.1 Barley cytosol 46.13 39.72
TraesCS5D01G566200.1 Wheat cytosol, peroxisome, plastid 46.13 39.61
GSMUA_AchrUn_... Banana cytosol 40.97 39.32
TraesCS5B01G560300.1 Wheat cytosol, peroxisome, plastid 46.13 38.96
TraesCS4A01G319100.1 Wheat cytosol, peroxisome, plastid 45.81 38.9
KRH48309 Soybean cytosol 49.35 38.64
EER90481 Sorghum cytosol 45.48 37.2
Os03t0856700-02 Rice cytosol, mitochondrion 43.87 36.56
CDY70184 Canola cytosol 36.77 34.97
TraesCS3D01G393900.1 Wheat cytosol 39.68 34.55
Zm00001d034898_P001 Maize plastid 44.52 34.16
TraesCS3A01G399800.1 Wheat cytosol 39.35 34.08
HORVU3Hr1G089980.2 Barley cytosol 38.71 33.61
Os07t0169700-01 Rice plasma membrane 39.68 33.52
TraesCS3D01G394000.1 Wheat cytosol, peroxisome, plastid 38.71 33.43
TraesCS3B01G432800.1 Wheat cytosol 38.71 33.33
EER95912 Sorghum cytosol 39.68 32.2
CDY36334 Canola cytosol 12.58 31.97
Zm00001d007894_P001 Maize cytosol 39.03 30.71
CDX99287 Canola cytoskeleton, cytosol, peroxisome 25.16 22.41
CDX92296 Canola cytosol, nucleus, peroxisome 25.16 22.35
CDX82318 Canola cytosol 25.16 22.1
CDY22994 Canola cytosol 25.16 22.1
CDY22995 Canola cytosol 25.16 22.1
CDX82317 Canola cytosol 25.16 22.1
CDX92294 Canola cytosol 24.19 21.31
CDX99288 Canola cytosol 24.19 21.31
CDY69351 Canola cytosol, peroxisome 15.16 20.8
CDY13228 Canola cytosol 2.9 12.16
Protein Annotations
MapMan:11.6.1.5Gene3D:2.60.120.330GO:A0A078JGS5UniProt:A0A078JGS5EnsemblPlants:CDY64866ProteinID:CDY64866
ProteinID:CDY64866.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00043758001InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471
PANTHER:PTHR10209PANTHER:PTHR10209:SF140SUPFAM:SSF51197UniParc:UPI0004EEA706::
Description
BnaAnng19650DBnaAnng19650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGS5]
Coordinates
chrLK034581:-:3146..4278
Molecular Weight (calculated)
35159.6 Da
IEP (calculated)
5.913
GRAVY (calculated)
-0.424
Length
310 amino acids
Sequence
(BLAST)
001: MEYITELSFN GKKTEDNPLT LFGSTVINNQ QNQIPQEFVW PEDKKPSANV PILQIPLIDL AGVLSGDQFL VSEATRLVAE GAKQHGFFLV TNHGVDEGLM
101: SSACTLMDSF FKSPTCEKQK AQRNHDESWG YTSSFVGKFK KNLPWKEMLS FRFSPQEKSE NHSEIVKDFI IKKMGYGYND FGSVYQEYAQ AMSNLSLRIM
201: ELLAMSLGIK RSHFVEFFED NESILRLNYY PKCKQPNDVL GSGPHCDPTS LTILQQDHSG LQVFVDNQWQ SIPYNPQALV VNIGDTFRVT SPSPLSSVNT
301: FTKKKNFSEY
Best Arabidopsis Sequence Match ( AT1G60980.1 )
(BLAST)
001: MECIIKLPQR FNKNKSKKNP LRIFDSTVLN HQPDHIPQEF VWPDHEKPSK NVPILQVPVI DLAGFLSNDP LLVSEAERLV SEAAKKHGFF LVTNHGVDER
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
Arabidopsis Description
GA20OX4Gibberellin 20 oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C955]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.