Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12880 | Canola | cytosol, nucleus, vacuole | 97.7 | 90.31 |
| Bra027106.1-P | Field mustard | cytosol | 85.93 | 89.36 |
| AT1G60980.1 | Thale cress | cytosol, mitochondrion, peroxisome | 68.03 | 70.74 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 55.75 | 70.32 |
| CDY64867 | Canola | cytosol | 66.5 | 69.52 |
| CDY60083 | Canola | vacuole | 69.05 | 67.16 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 64.19 | 66.23 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 63.94 | 65.96 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 63.43 | 65.44 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 62.92 | 65.08 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 62.92 | 64.91 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 61.89 | 64.02 |
| CDY72226 | Canola | mitochondrion | 37.34 | 56.37 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 39.64 | 55.56 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 49.36 | 55.14 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 41.69 | 52.92 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 50.38 | 52.25 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 50.38 | 52.12 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 50.64 | 51.97 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 50.13 | 51.72 |
| Solyc01g093980.2.1 | Tomato | cytosol | 48.08 | 51.65 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 50.13 | 51.58 |
| PGSC0003DMT400000036 | Potato | cytosol | 48.08 | 51.51 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 49.87 | 51.32 |
| VIT_15s0048g01320.t01 | Wine grape | cytosol | 50.38 | 51.3 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 50.13 | 51.17 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 49.1 | 51.06 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 40.66 | 50.8 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 48.85 | 50.8 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 45.78 | 49.72 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 45.78 | 49.58 |
| TraesCS5B01G560300.1 | Wheat | cytosol, peroxisome, plastid | 45.78 | 48.77 |
| CDY13227 | Canola | cytosol | 21.23 | 48.54 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 45.27 | 48.49 |
| KRH65199 | Soybean | cytosol | 47.31 | 48.43 |
| EER90481 | Sorghum | cytosol | 46.8 | 48.28 |
| KRH48309 | Soybean | cytosol | 48.08 | 47.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.87 | 47.06 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 44.76 | 47.04 |
| CDY71240 | Canola | cytosol, peroxisome, plastid | 30.95 | 45.32 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 40.92 | 44.94 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 40.41 | 44.13 |
| Zm00001d034898_P001 | Maize | plastid | 45.27 | 43.81 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 39.64 | 43.06 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 39.13 | 42.62 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 38.87 | 42.58 |
| Os07t0169700-01 | Rice | plasma membrane | 39.9 | 42.51 |
| EER95912 | Sorghum | cytosol | 39.39 | 40.31 |
| Zm00001d007894_P001 | Maize | cytosol | 39.13 | 38.83 |
| CDY70184 | Canola | cytosol | 31.97 | 38.34 |
| CDY36334 | Canola | cytosol | 10.23 | 32.79 |
| CDY13228 | Canola | cytosol | 5.37 | 28.38 |
| CDY69351 | Canola | cytosol, peroxisome | 16.37 | 28.32 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 24.55 | 27.51 |
| CDX99287 | Canola | cytoskeleton, cytosol, peroxisome | 24.3 | 27.3 |
| CDX82317 | Canola | cytosol | 23.53 | 26.06 |
| CDX82318 | Canola | cytosol | 23.53 | 26.06 |
| CDY22995 | Canola | cytosol | 23.53 | 26.06 |
| CDY22994 | Canola | cytosol | 23.53 | 26.06 |
| CDX92294 | Canola | cytosol | 22.76 | 25.28 |
| CDX99288 | Canola | cytosol | 22.76 | 25.28 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | GO:A0A078I5W1 | UniProt:A0A078I5W1 | EnsemblPlants:CDY44829 | ProteinID:CDY44829 |
| ProteinID:CDY44829.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0046872 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00080857001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF140 |
| SUPFAM:SSF51197 | TMHMM:TMhelix | UniParc:UPI0004EF286F | SEG:seg | : | : |
Description
BnaCnng11850DBnaCnng11850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5W1]
Coordinates
chrLK032602:+:194972..196882
Molecular Weight (calculated)
44397.1 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.298
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPETFNENA TKNNPLKTLF SLLKSLLSSC FFLISNIFSY HFIFTHEMES IKTLPQTFDE DANKNNPLMI FDSADLNNKS DKIPQEFVWP DHDKPSKNVP
101: ILQVPLIDLA CFLSGNPFLV SEATRLVAEA AKQHGFFLVI NHGIDEKLLS GACTLMDKFF KSPSCEKQKA QRKWGESSGY ASSFVGRFRK NLPWKETLSF
201: AFSPGEKSEN HSQDVKEFIV KKMGDEYKDF GIVYQEYAEA MSDLSLKIME FLGMSLGINR SHFKEFFEDN ESIFRLNYYP QCKQPNVVLG SGPHCDPTSL
301: TILQQDQING LQAFVDNQWQ AILPNPQALV VNIGDTFMAL TNGIYRSCLH RALVNSKTER KTLAFFLSPK MDKVVRPPAE LGGERAYPDF T
101: ILQVPLIDLA CFLSGNPFLV SEATRLVAEA AKQHGFFLVI NHGIDEKLLS GACTLMDKFF KSPSCEKQKA QRKWGESSGY ASSFVGRFRK NLPWKETLSF
201: AFSPGEKSEN HSQDVKEFIV KKMGDEYKDF GIVYQEYAEA MSDLSLKIME FLGMSLGINR SHFKEFFEDN ESIFRLNYYP QCKQPNVVLG SGPHCDPTSL
301: TILQQDQING LQAFVDNQWQ AILPNPQALV VNIGDTFMAL TNGIYRSCLH RALVNSKTER KTLAFFLSPK MDKVVRPPAE LGGERAYPDF T
001: MECIIKLPQR FNKNKSKKNP LRIFDSTVLN HQPDHIPQEF VWPDHEKPSK NVPILQVPVI DLAGFLSNDP LLVSEAERLV SEAAKKHGFF LVTNHGVDER
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
Arabidopsis Description
GA20OX4Gibberellin 20 oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C955]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.