Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13228 | Canola | cytosol | 25.81 | 97.3 |
| Bra010064.1-P | Field mustard | cytosol | 100.0 | 74.01 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 95.34 | 69.82 |
| CDY72226 | Canola | mitochondrion | 57.71 | 62.16 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 67.74 | 49.87 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 67.74 | 49.87 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 61.29 | 48.86 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 66.31 | 48.81 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 65.95 | 48.55 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 64.87 | 47.88 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 64.52 | 47.62 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 61.29 | 45.36 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 61.29 | 45.24 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 61.29 | 44.65 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 59.14 | 43.88 |
| CDY64867 | Canola | cytosol | 58.78 | 43.85 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 59.5 | 43.8 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 59.5 | 43.68 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 58.78 | 43.62 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 48.03 | 43.51 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 59.14 | 43.42 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 48.39 | 43.13 |
| Solyc01g093980.2.1 | Tomato | cytosol | 54.84 | 42.03 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 54.48 | 41.64 |
| PGSC0003DMT400000036 | Potato | cytosol | 54.48 | 41.64 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 53.76 | 41.55 |
| TraesCS5B01G560300.1 | Wheat | cytosol, peroxisome, plastid | 54.48 | 41.42 |
| VIT_15s0048g01320.t01 | Wine grape | cytosol | 56.99 | 41.41 |
| KRH65199 | Soybean | cytosol | 56.63 | 41.36 |
| KRH48309 | Soybean | cytosol | 58.06 | 40.91 |
| EER90481 | Sorghum | cytosol | 55.56 | 40.9 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 54.48 | 40.86 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 52.69 | 40.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.59 | 40.25 |
| CDY60083 | Canola | vacuole | 57.71 | 40.05 |
| CDY44829 | Canola | cytosol | 55.56 | 39.64 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 59.5 | 39.24 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 43.01 | 38.71 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 49.46 | 38.66 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 49.1 | 38.27 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 48.39 | 37.92 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 48.75 | 37.88 |
| Zm00001d034898_P001 | Maize | plastid | 54.84 | 37.87 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 48.75 | 37.78 |
| Os07t0169700-01 | Rice | plasma membrane | 48.39 | 36.78 |
| CDY13227 | Canola | cytosol | 22.22 | 36.26 |
| EER95912 | Sorghum | cytosol | 49.1 | 35.86 |
| Zm00001d007894_P001 | Maize | cytosol | 48.39 | 34.26 |
| CDY71240 | Canola | cytosol, peroxisome, plastid | 31.9 | 33.33 |
| CDY69351 | Canola | cytosol, peroxisome | 24.37 | 30.09 |
| CDY70184 | Canola | cytosol | 34.77 | 29.75 |
| CDY22994 | Canola | cytosol | 31.18 | 24.65 |
| CDY22995 | Canola | cytosol | 31.18 | 24.65 |
| CDX82318 | Canola | cytosol | 31.18 | 24.65 |
| CDX82317 | Canola | cytosol | 31.18 | 24.65 |
| CDX99287 | Canola | cytoskeleton, cytosol, peroxisome | 30.11 | 24.14 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 29.75 | 23.78 |
| CDX99288 | Canola | cytosol | 29.03 | 23.01 |
| CDX92294 | Canola | cytosol | 29.03 | 23.01 |
| CDY36334 | Canola | cytosol | 3.94 | 9.02 |
Protein Annotations
| EnsemblPlants:CDY00263 | EnsemblPlantsGene:GSBRNA2T00109824001 | Gene3D:2.60.120.330 | GO:A0A078ELK7 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF140 | PFAM:PF03171 | PFscan:PS51471 |
| ProteinID:CDY00263 | ProteinID:CDY00263.1 | SUPFAM:SSF51197 | UniParc:UPI0004EDD0BD | MapMan:11.6.1.5 | : |
Description
BnaA06g21640D
Coordinates
chrLK031917:+:570198..571804
Molecular Weight (calculated)
32392.5 Da
IEP (calculated)
8.686
GRAVY (calculated)
-0.557
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTFFYLPAS EKQKAKRKWG EISGYADSFA GRFYSELPWK ETLTFRFSAE EKLRSGTETV KDYVSKTMGD GNEEFGTVFQ EYSEAMNTLS LNIIEFLGMS
101: LGIERRYMRE FYRDNDSILR LNYYPPCKQP NHTLGTGPHT DPTSLTILYQ DHVGGLQVYV ENQWRSIAPK PQSFVVNIGD TFVALTNGIY RSCLHRAVVN
201: RDRERMTLAF FLCPQMDKVV KPPKELLEVS GQRLYPNFTW SMFLEFTQKN YRSDKNTLQK FSDWLRSKEV IDNKLAGQS
101: LGIERRYMRE FYRDNDSILR LNYYPPCKQP NHTLGTGPHT DPTSLTILYQ DHVGGLQVYV ENQWRSIAPK PQSFVVNIGD TFVALTNGIY RSCLHRAVVN
201: RDRERMTLAF FLCPQMDKVV KPPKELLEVS GQRLYPNFTW SMFLEFTQKN YRSDKNTLQK FSDWLRSKEV IDNKLAGQS
001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
Arabidopsis Description
GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.