Factsheet for Os03t0856700-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 15069638

msms PMID: 15069638 doi

N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G124120.1	Barley	cytosol	69.09	71.39
TraesCS5D01G566200.1	Wheat	cytosol, peroxisome, plastid	69.09	71.19
TraesCS5B01G560300.1	Wheat	cytosol, peroxisome, plastid	69.62	70.57
EER90481	Sorghum	cytosol	71.77	70.45
TraesCS4A01G319100.1	Wheat	cytosol, peroxisome, plastid	68.55	69.86
Zm00001d034898_P001	Maize	plastid	69.89	64.36
PGSC0003DMT400086432	Potato	cytosol	26.08	62.18
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	51.34	62.01
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	52.15	61.98
CDY49714	Canola	cytosol, nucleus, peroxisome	56.18	59.71
PGSC0003DMT400092587	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	25.81	59.63
CDY72226	Canola	mitochondrion	41.4	59.46
Bra019165.1-P	Field mustard	cytosol	55.91	59.43
PGSC0003DMT400062314	Potato	cytosol	59.41	58.47
PGSC0003DMT400091205	Potato	cytosol, nucleus, peroxisome	24.73	58.23
KRG91415	Soybean	cytosol	59.68	57.96
PGSC0003DMT400036523	Potato	cytosol	48.39	57.88
VIT_16s0022g02310.t01	Wine grape	cytosol	59.41	57.85
KRH38652	Soybean	cytosol	59.14	57.59
Solyc03g006880.2.1	Tomato	cytosol	58.33	57.41
KRH35405	Soybean	cytosol	54.84	55.89
CDX94446	Canola	cytosol, nucleus, peroxisome	56.45	55.85
CDY55723	Canola	cytosol, nucleus, peroxisome	56.45	55.85
Bra013890.1-P	Field mustard	cytosol	56.18	55.59
PGSC0003DMT400090397	Potato	cytosol	55.65	55.5
VIT_15s0048g01320.t01	Wine grape	cytosol	57.26	55.47
AT4G25420.1	Thale cress	cytosol, nucleus, peroxisome	56.18	55.44
CDX92707	Canola	cytosol, nucleus, peroxisome	56.99	55.35
Solyc01g093980.2.1	Tomato	cytosol	54.03	55.22
Solyc11g072310.1.1	Tomato	cytosol	56.18	55.15
Os07t0169700-01	Rice	plasma membrane	54.3	55.04
KRH09174	Soybean	cytosol	44.89	54.93
PGSC0003DMT400071866	Potato	cytosol	55.38	54.93
PGSC0003DMT400000036	Potato	cytosol	53.76	54.79
Solyc09g009110.2.1	Tomato	cytosol	55.65	54.76
PGSC0003DMT400042644	Potato	cytosol	49.46	54.76
GSMUA_AchrUn_...	Banana	cytosol	47.31	54.49
CDY00263	Canola	cytosol, nucleus, peroxisome	40.86	54.48
PGSC0003DMT400090198	Potato	mitochondrion	13.17	54.44
Solyc06g035530.2.1	Tomato	cytosol	54.3	54.3
Solyc06g050110.1.1	Tomato	cytosol	52.15	53.44
CDY58871	Canola	cytosol, endoplasmic reticulum, peroxisome	54.3	53.44
CDY27101	Canola	cytosol, nucleus, peroxisome	54.03	53.32
Bra022565.1-P	Field mustard	cytosol	53.76	53.05
CDX91609	Canola	cytosol, nucleus, peroxisome	53.49	52.65
CDX81038	Canola	cytosol, nucleus, peroxisome	53.49	52.65
Bra005927.1-P	Field mustard	cytosol	45.7	52.15
CDX99892	Canola	cytosol, nucleus, peroxisome	52.96	51.98
AT5G51810.1	Thale cress	cytosol, nucleus, peroxisome	52.69	51.85
CDX99893	Canola	cytosol, nucleus, peroxisome	52.96	51.84
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	52.69	51.58
CDY00499	Canola	cytosol, nucleus, peroxisome	52.69	51.58
CDY13228	Canola	cytosol	10.22	51.35
CDY14054	Canola	cytosol, nucleus, peroxisome	52.15	51.19
PGSC0003DMT400088638	Potato	cytosol	34.68	50.99
CDX70015	Canola	cytosol, nucleus, peroxisome	51.88	50.92
CDX98998	Canola	cytosol, nucleus, peroxisome	51.88	50.92
CDY05017	Canola	cytosol, nucleus, peroxisome	51.61	50.66
Bra009285.1-P	Field mustard	cytosol	51.61	50.66
AT5G07200.1	Thale cress	cytosol, nucleus, peroxisome	51.61	50.53
KRH65199	Soybean	cytosol	51.88	50.52
Bra028706.1-P	Field mustard	cytosol	51.34	50.4
Bra027106.1-P	Field mustard	cytosol	50.0	49.47
AT1G60980.1	Thale cress	cytosol, mitochondrion, peroxisome	49.73	49.2
Bra010064.1-P	Field mustard	cytosol	49.73	49.07
Solyc10g045690.1.1	Tomato	cytosol, nucleus, peroxisome	25.0	48.95
CDY52529	Canola	cytosol, nucleus, peroxisome	50.0	48.82
KRH48309	Soybean	cytosol	51.88	48.74
PGSC0003DMT400091526	Potato	cytosol	30.91	48.12
PGSC0003DMT400088528	Potato	cytosol, peroxisome, plastid	16.67	48.06
Bra039251.1-P	Field mustard	cytosol	47.58	47.33
CDY64867	Canola	cytosol	47.31	47.06
Os01t0883800-02	Rice	cytosol	48.39	46.27
Bra031467.1-P	Field mustard	cytosol	45.7	45.09
CDY44829	Canola	cytosol	47.04	44.76
PGSC0003DMT400097234	Potato	cytosol, mitochondrion, plastid	15.05	44.44
CDY12880	Canola	cytosol, nucleus, vacuole	50.0	43.97
CDY64866	Canola	cytosol, nucleus, peroxisome	36.56	43.87
CDY60083	Canola	vacuole	47.31	43.78
PGSC0003DMT400089703	Potato	nucleus	17.47	43.33
Os05t0421900-00	Rice	cytosol	47.04	42.89
Solyc10g046820.1.1	Tomato	cytosol, nucleus, peroxisome	22.31	42.13
CDY13227	Canola	cytosol	18.82	40.94
Solyc10g045770.1.1	Tomato	cytosol	11.83	40.37
PGSC0003DMT400086504	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	10.48	34.51
Os03t0618300-01	Rice	cytosol	26.88	28.41
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	17.74	24.72

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	EntrezGene:4334841	ProteinID:ABF99990.1	EMBL:AK099111	ProteinID:BAF13865.1
ProteinID:BAS87451.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	EnsemblPlantsGene:Os03g0856700	EnsemblPlants:Os03t0856700-02	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF140	UniProt:Q10AC7	SUPFAM:SSF51197
UniParc:UPI0000DB4F1D	RefSeq:XP_015628526.1	SEG:seg	:	:	:

Description

GIBBERELLIN 20-OXIDASE 1Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox). (Os03t0856700-01);GA 20-oxidase1, GA metabolism (Os03t0856700-02)

Coordinates

chr3:+:36150736..36152355

Molecular Weight (calculated)

42258.1 Da

IEP (calculated)

6.407

GRAVY (calculated)

-0.358

Length

372 amino acids

Sequence
(BLAST)

001: MSMVVQQEQE VVFDAAVLSG QTEIPSQFIW PAEESPGSVA VEELEVALID VGAGAERSSV VRQVGEACER HGFFLVVNHG IEAALLEEAH RCMDAFFTLP
101: LGEKQRAQRR AGESCGYASS FTGRFASKLP WKETLSFRYS SAGDEEGEEG VGEYLVRKLG AEHGRRLGEV YSRYCHEMSR LSLELMEVLG ESLGIVGDRR
201: HYFRRFFQRN DSIMRLNYYP ACQRPLDTLG TGPHCDPTSL TILHQDHVGG LEVWAEGRWR AIRPRPGALV VNVGDTFMAL SNARYRSCLH RAVVNSTAPR
301: RSLAFFLCPE MDTVVRPPEE LVDDHHPRVY PDFTWRALLD FTQRHYRADM RTLQAFSDWL NHHRHLQPTI YS

Best Arabidopsis Sequence Match ( AT4G25420.1 )
(BLAST)

001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI

Arabidopsis Description

GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.