Factsheet for Bra009285.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70015	Canola	cytosol, nucleus, peroxisome	99.47	99.47
CDX98998	Canola	cytosol, nucleus, peroxisome	97.63	97.63
Bra028706.1-P	Field mustard	cytosol	88.65	88.65
Bra005927.1-P	Field mustard	cytosol	75.46	87.73
AT5G07200.1	Thale cress	cytosol, nucleus, peroxisome	86.54	86.32
Bra027106.1-P	Field mustard	cytosol	72.03	72.61
Bra031467.1-P	Field mustard	cytosol	69.13	69.5
Bra039251.1-P	Field mustard	cytosol	68.07	68.98
Bra019165.1-P	Field mustard	cytosol	58.84	63.71
Bra010064.1-P	Field mustard	cytosol	62.8	63.13
Bra022565.1-P	Field mustard	cytosol	61.21	61.54
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	60.42	60.26
Bra013890.1-P	Field mustard	cytosol	58.84	59.31
PGSC0003DMT400000036	Potato	cytosol	56.46	58.63
VIT_15s0048g01320.t01	Wine grape	cytosol	59.37	58.59
Solyc01g093980.2.1	Tomato	cytosol	56.2	58.52
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	47.49	58.44
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	47.76	57.83
HORVU5Hr1G124120.1	Barley	cytosol	54.09	56.94
KRH65199	Soybean	cytosol	57.26	56.81
TraesCS5D01G566200.1	Wheat	cytosol, peroxisome, plastid	54.09	56.79
TraesCS4A01G319100.1	Wheat	cytosol, peroxisome, plastid	53.83	55.89
TraesCS5B01G560300.1	Wheat	cytosol, peroxisome, plastid	54.09	55.86
KRH48309	Soybean	cytosol	58.05	55.56
EER90481	Sorghum	cytosol	54.88	54.88
GSMUA_AchrUn_...	Banana	cytosol	45.12	52.94
Os03t0856700-02	Rice	cytosol, mitochondrion	50.66	51.61
TraesCS3D01G393900.1	Wheat	cytosol	48.28	51.4
TraesCS3A01G399800.1	Wheat	cytosol	48.28	51.12
TraesCS3B01G432800.1	Wheat	cytosol	47.76	50.28
Zm00001d034898_P001	Maize	plastid	53.56	50.25
HORVU3Hr1G089980.2	Barley	cytosol	47.23	50.14
TraesCS3D01G394000.1	Wheat	cytosol, peroxisome, plastid	47.49	50.14
Os07t0169700-01	Rice	plasma membrane	48.55	50.14
Bra014019.1-P	Field mustard	cytosol	44.85	47.62
EER95912	Sorghum	cytosol	46.44	46.07
Zm00001d007894_P001	Maize	cytosol	46.17	44.42
Bra022378.1-P	Field mustard	cytosol	28.23	30.66
Bra022377.1-P	Field mustard	cytosol	27.44	29.55
Bra001729.1-P	Field mustard	nucleus	24.01	15.77

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra009285	EnsemblPlants:Bra009285.1	EnsemblPlants:Bra009285.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4CYI8
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF140	SUPFAM:SSF51197	UniParc:UPI00025437A1	:	:	:

Description

AT5G07200 (E=2e-195) YAP169, GA20OX3, ATGA20OX3 | YAP169; gibberellin 20-oxidase

Coordinates

chrA10:+:15978051..15979483

Molecular Weight (calculated)

43447.5 Da

IEP (calculated)

6.426

GRAVY (calculated)

-0.464

Length

379 amino acids

Sequence
(BLAST)

001: MAMECIATLP QRFNDNKTKG DPSIFDANLL NQLSNHIPQQ FVWPDHEKPS TDVQPLQAPL IDLAGFLSDD SFLVSEATRL VSEASKKHGF FLVTNHGVDE
101: TLLSRAYLFM DSFFKAPACE KQKAQRTWGE SSGYASSFVG RFSSKLPWKE TLSFKFSPEE KCQSQAVKDF VSKKMGDEYN NFGKVYQEYA EAMNILSLKI
201: MELLGMSLGI ERRHFRDFFE DNESILRLNY YPQCNQPELT LGTGPHCDPT SLTILHQDQV AGLQVYVDNK WQSIPPNPQA FVVNIGDTFM ALTNGIYKSC
301: LHRAVVNSER ERKTFAFFLC PKGDKMVKPP KELVGVMSGE REYPDFTWST FLEFTQKHYR SDMNTLEEFS NWLKNRKSF

Best Arabidopsis Sequence Match ( AT5G07200.1 )
(BLAST)

001: MATECIATVP QIFSENKTKE DSSIFDAKLL NQHSHHIPQQ FVWPDHEKPS TDVQPLQVPL IDLAGFLSGD SCLASEATRL VSKAATKHGF FLITNHGVDE
101: SLLSRAYLHM DSFFKAPACE KQKAQRKWGE SSGYASSFVG RFSSKLPWKE TLSFKFSPEE KIHSQTVKDF VSKKMGDGYE DFGKVYQEYA EAMNTLSLKI
201: MELLGMSLGV ERRYFKEFFE DSDSIFRLNY YPQCKQPELA LGTGPHCDPT SLTILHQDQV GGLQVFVDNK WQSIPPNPHA FVVNIGDTFM ALTNGRYKSC
301: LHRAVVNSER ERKTFAFFLC PKGEKVVKPP EELVNGVKSG ERKYPDFTWS MFLEFTQKHY RADMNTLDEF SIWLKNRRSF

Arabidopsis Description

GA20OX3Gibberellin 20 oxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q39112]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.