Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G399800.1 | Wheat | cytosol | 73.57 | 75.42 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 73.02 | 75.28 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 73.3 | 74.93 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 72.75 | 74.79 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 73.3 | 74.72 |
| EER95912 | Sorghum | cytosol | 75.2 | 72.25 |
| Zm00001d007894_P001 | Maize | cytosol | 76.29 | 71.07 |
| PGSC0003DMT400086432 | Potato | cytosol | 24.8 | 58.33 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 49.32 | 57.83 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 47.14 | 56.17 |
| CDY72226 | Canola | mitochondrion | 38.96 | 55.21 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 55.04 | 54.3 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 50.14 | 52.57 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.05 | 52.32 |
| Bra019165.1-P | Field mustard | cytosol | 49.86 | 52.29 |
| Bra022565.1-P | Field mustard | cytosol | 51.5 | 50.13 |
| KRG91415 | Soybean | cytosol | 52.32 | 50.13 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 51.23 | 49.87 |
| PGSC0003DMT400036523 | Potato | cytosol | 42.23 | 49.84 |
| PGSC0003DMT400062314 | Potato | cytosol | 51.23 | 49.74 |
| Solyc01g093980.2.1 | Tomato | cytosol | 49.32 | 49.73 |
| PGSC0003DMT400092587 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 21.8 | 49.69 |
| PGSC0003DMT400000036 | Potato | cytosol | 49.32 | 49.59 |
| AT5G51810.1 | Thale cress | cytosol, nucleus, peroxisome | 50.95 | 49.47 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 50.68 | 49.47 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 50.68 | 49.21 |
| Solyc03g006880.2.1 | Tomato | cytosol | 50.68 | 49.21 |
| Bra013890.1-P | Field mustard | cytosol | 50.41 | 49.2 |
| AT4G25420.1 | Thale cress | cytosol, nucleus, peroxisome | 50.41 | 49.07 |
| VIT_16s0022g02310.t01 | Wine grape | cytosol | 50.95 | 48.95 |
| KRH38652 | Soybean | cytosol | 50.95 | 48.95 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 50.41 | 48.81 |
| PGSC0003DMT400091205 | Potato | cytosol, nucleus, peroxisome | 20.98 | 48.73 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 49.86 | 48.67 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 50.68 | 48.56 |
| Bra009285.1-P | Field mustard | cytosol | 50.14 | 48.55 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 50.14 | 48.55 |
| PGSC0003DMT400090397 | Potato | cytosol | 49.32 | 48.53 |
| PGSC0003DMT400042644 | Potato | cytosol | 44.41 | 48.51 |
| KRH35405 | Soybean | cytosol | 48.23 | 48.49 |
| VIT_15s0048g01320.t01 | Wine grape | cytosol | 50.68 | 48.44 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 49.86 | 48.41 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 36.78 | 48.39 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 49.86 | 48.28 |
| KRH65199 | Soybean | cytosol | 50.14 | 48.17 |
| Bra028277.1-P | Field mustard | cytosol, nucleus, peroxisome | 49.86 | 48.16 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 49.86 | 48.16 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 49.86 | 48.16 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 49.59 | 48.15 |
| Solyc09g009110.2.1 | Tomato | cytosol | 49.32 | 47.88 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 49.32 | 47.76 |
| Solyc11g072310.1.1 | Tomato | cytosol | 49.32 | 47.76 |
| KRH09174 | Soybean | cytosol | 39.51 | 47.7 |
| AT5G07200.1 | Thale cress | cytosol, nucleus, peroxisome | 49.32 | 47.63 |
| Bra005927.1-P | Field mustard | cytosol | 42.23 | 47.55 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 49.05 | 47.49 |
| PGSC0003DMT400071866 | Potato | cytosol | 48.5 | 47.47 |
| Bra028706.1-P | Field mustard | cytosol | 48.77 | 47.23 |
| Os01t0883800-02 | Rice | cytosol | 49.86 | 47.04 |
| Solyc06g035530.2.1 | Tomato | cytosol | 47.68 | 47.04 |
| AT1G60980.1 | Thale cress | cytosol, mitochondrion, peroxisome | 47.96 | 46.81 |
| PGSC0003DMT400090198 | Potato | mitochondrion | 11.44 | 46.67 |
| KRH48309 | Soybean | cytosol | 49.86 | 46.21 |
| Solyc06g050110.1.1 | Tomato | cytosol | 45.5 | 46.01 |
| CDY13228 | Canola | cytosol | 9.26 | 45.95 |
| Bra010064.1-P | Field mustard | cytosol | 46.59 | 45.36 |
| Os05t0421900-00 | Rice | cytosol | 50.14 | 45.1 |
| Bra027106.1-P | Field mustard | cytosol | 46.05 | 44.95 |
| PGSC0003DMT400088638 | Potato | cytosol | 30.79 | 44.66 |
| PGSC0003DMT400088528 | Potato | cytosol, peroxisome, plastid | 15.53 | 44.19 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 45.78 | 44.09 |
| PGSC0003DMT400091526 | Potato | cytosol | 28.07 | 43.1 |
| Bra039251.1-P | Field mustard | cytosol | 43.87 | 43.05 |
| CDY64867 | Canola | cytosol | 43.6 | 42.78 |
| Bra031467.1-P | Field mustard | cytosol | 43.87 | 42.71 |
| PGSC0003DMT400097234 | Potato | cytosol, mitochondrion, plastid | 14.44 | 42.06 |
| Solyc10g045690.1.1 | Tomato | cytosol, nucleus, peroxisome | 21.53 | 41.58 |
| CDY60083 | Canola | vacuole | 44.41 | 40.55 |
| CDY44829 | Canola | cytosol | 42.51 | 39.9 |
| PGSC0003DMT400086504 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 12.26 | 39.82 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 45.78 | 39.72 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 33.52 | 39.68 |
| Solyc10g045770.1.1 | Tomato | cytosol | 11.72 | 39.45 |
| CDY13227 | Canola | cytosol | 17.17 | 36.84 |
| PGSC0003DMT400089703 | Potato | nucleus | 13.9 | 34.0 |
| Os03t0618300-01 | Rice | cytosol | 30.25 | 31.53 |
| Solyc10g046820.1.1 | Tomato | cytosol, nucleus, peroxisome | 16.89 | 31.47 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 17.44 | 23.97 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | ProteinID:BAD31785.1 | ProteinID:BAF20901.1 | ProteinID:BAT00232.1 | InterPro:DIOX_N |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006629 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009416 |
| GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009685 | GO:GO:0009686 | GO:GO:0009719 | GO:GO:0009740 |
| GO:GO:0009791 | GO:GO:0009826 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0016491 | GO:GO:0040007 | GO:GO:0045544 | GO:GO:0046872 | GO:GO:0051213 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | EnsemblPlantsGene:Os07g0169700 | EnsemblPlants:Os07t0169700-01 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF118 |
| UniProt:Q69LD8 | SUPFAM:SSF51197 | UniParc:UPI00001BF72F | SEG:seg | : | : |
Description
GIBBERELLIN 20-OXIDASE 3GA 20-oxidase3, GA metabolism (Os07t0169700-01)
Coordinates
chr7:+:3702346..3704648
Molecular Weight (calculated)
40496.9 Da
IEP (calculated)
6.087
GRAVY (calculated)
-0.188
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVVFDAAI LSKQEAIPAQ FVWPADEAPA ADDGVVEEIA IPVVDLAAFL ASGGIGRDVA EACERHGFFQ VVNHGVDPAL LAEAYRCCDA FYARPLAEKQ
101: RARRRPGENH GYASSFTGRF DCKLPWKETM SFNCSAAPGN ARMVADYFVD ALGEEYRHMG EVYQEYCDVM TRLALDVTEV LAVALGLGRG ELRGFFADGD
201: PVMRLNHYPP CRQPHLTLGT GPHRDPTSLT LLHQDDVGGL QVLPDDAAAA AGGWRAVRPR ADAFVVNIGD TFAALTNGRH ASCLHRAVVN GRVARRSLTF
301: FLNPRLDRVV SPPPALVDAA HPRAFPDFTW REFLEFTQRH YRSDTNTMDA FVAWIKQRNG YESLDKY
101: RARRRPGENH GYASSFTGRF DCKLPWKETM SFNCSAAPGN ARMVADYFVD ALGEEYRHMG EVYQEYCDVM TRLALDVTEV LAVALGLGRG ELRGFFADGD
201: PVMRLNHYPP CRQPHLTLGT GPHRDPTSLT LLHQDDVGGL QVLPDDAAAA AGGWRAVRPR ADAFVVNIGD TFAALTNGRH ASCLHRAVVN GRVARRSLTF
301: FLNPRLDRVV SPPPALVDAA HPRAFPDFTW REFLEFTQRH YRSDTNTMDA FVAWIKQRNG YESLDKY
001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI
Arabidopsis Description
GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.