Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g006880.2.1 | Tomato | cytosol | 76.52 | 76.72 |
| Solyc06g035530.2.1 | Tomato | cytosol | 72.82 | 74.19 |
| Solyc09g009110.2.1 | Tomato | cytosol | 70.18 | 70.37 |
| Solyc06g050110.1.1 | Tomato | cytosol | 66.75 | 69.7 |
| KRH38652 | Soybean | cytosol | 69.13 | 68.59 |
| VIT_16s0022g02310.t01 | Wine grape | cytosol | 68.34 | 67.8 |
| KRG91415 | Soybean | cytosol | 66.49 | 65.8 |
| Solyc10g045690.1.1 | Tomato | cytosol, nucleus, peroxisome | 32.98 | 65.79 |
| KRH09174 | Soybean | cytosol | 51.98 | 64.8 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 52.24 | 64.29 |
| Solyc01g093980.2.1 | Tomato | cytosol | 61.48 | 64.01 |
| KRH35405 | Soybean | cytosol | 61.48 | 63.84 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 58.58 | 61.67 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 50.66 | 61.34 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 58.31 | 61.22 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 58.05 | 60.27 |
| TraesCS5B01G560300.1 | Wheat | cytosol, peroxisome, plastid | 58.31 | 60.22 |
| EER90481 | Sorghum | cytosol | 57.26 | 57.26 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 55.15 | 56.18 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.76 | 56.04 |
| Zm00001d034898_P001 | Maize | plastid | 57.26 | 53.71 |
| Solyc09g042210.1.1 | Tomato | cytosol, mitochondrion, nucleus, peroxisome | 17.94 | 52.31 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 48.81 | 51.82 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 48.55 | 51.69 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 48.28 | 51.12 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 48.28 | 50.97 |
| Solyc10g046820.1.1 | Tomato | cytosol, nucleus, peroxisome | 26.39 | 50.76 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 48.02 | 50.56 |
| Solyc10g045770.1.1 | Tomato | cytosol | 14.51 | 50.46 |
| Os07t0169700-01 | Rice | plasma membrane | 47.76 | 49.32 |
| Solyc09g018420.1.1 | Tomato | cytosol | 13.46 | 49.04 |
| Solyc11g013360.1.1 | Tomato | cytosol | 44.33 | 48.7 |
| EER95912 | Sorghum | cytosol | 46.97 | 46.6 |
| Zm00001d007894_P001 | Maize | cytosol | 46.44 | 44.67 |
| Solyc01g108860.2.1 | Tomato | cytosol | 27.7 | 29.91 |
| Solyc01g108880.2.1 | Tomato | cytosol, extracellular | 27.44 | 29.71 |
| Solyc12g013780.1.1 | Tomato | cytosol | 27.97 | 28.42 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | EMBL:AF049900 | InterPro:DIOX_N | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006629 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009653 |
| GO:GO:0009686 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009791 | GO:GO:0009826 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016491 | GO:GO:0040007 | GO:GO:0045544 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF140 |
| UniProt:Q9ZPP2 | SUPFAM:SSF51197 | EnsemblPlantsGene:Solyc11g072310.1 | EnsemblPlants:Solyc11g072310.1.1 | UniParc:UPI00000A9A46 | : |
Description
Gibberellin 20-oxidase-3 [Source:UniProtKB/TrEMBL;Acc:Q9ZPP2]
Coordinates
chr11:+:55508878..55511276
Molecular Weight (calculated)
43259.7 Da
IEP (calculated)
8.527
GRAVY (calculated)
-0.387
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDYMITRN NNMISKEDQV SNKSLSFNAS LMKNESNIPS QFIWPDHEKP NYASVTRELQ VPLIDLSGVL SNDPIEIKKA TRLVNEACTK HGFFLVVNHG
101: VDTNLIKNAH VYIDKFFQLP LCEKQKAQRK VGEHCGYASS FVGRFSSKLP WKETLSFQYS DQKGSSHIVE DYFQRTLGEK FSYIGKVYQE YCNAVSTLSL
201: GIMELLGLSL GVSKNHFKEF FQGNESIMRL NYYPTCQKPE LTLGTGPHCD PTSLTILHQD SVGGLQVFVD NEWHTITPNF NAFVVNIGDT FMALSNGRYK
301: SCLHRAVVNN KIPRKSLAFF LCPKKDKVIT PPNELVDSNN PRIYPDFTWP TLLEFTQKQY RADMNTLQTF SNWLKKTQS
101: VDTNLIKNAH VYIDKFFQLP LCEKQKAQRK VGEHCGYASS FVGRFSSKLP WKETLSFQYS DQKGSSHIVE DYFQRTLGEK FSYIGKVYQE YCNAVSTLSL
201: GIMELLGLSL GVSKNHFKEF FQGNESIMRL NYYPTCQKPE LTLGTGPHCD PTSLTILHQD SVGGLQVFVD NEWHTITPNF NAFVVNIGDT FMALSNGRYK
301: SCLHRAVVNN KIPRKSLAFF LCPKKDKVIT PPNELVDSNN PRIYPDFTWP TLLEFTQKQY RADMNTLQTF SNWLKKTQS
001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI
Arabidopsis Description
GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.