Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g01390.t01 | Wine grape | cytosol | 55.94 | 51.06 |
| KRH16465 | Soybean | cytosol, nucleus, peroxisome | 50.72 | 46.54 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 43.77 | 46.32 |
| KRH53327 | Soybean | cytosol | 48.99 | 46.17 |
| KRH18058 | Soybean | cytosol | 50.14 | 46.13 |
| GSMUA_Achr4P16380_001 | Banana | cytosol | 50.43 | 45.67 |
| GSMUA_Achr8P32560_001 | Banana | cytosol, nucleus, peroxisome | 42.9 | 45.4 |
| Solyc11g072310.1.1 | Tomato | cytosol | 48.7 | 44.33 |
| Solyc03g006880.2.1 | Tomato | cytosol | 48.41 | 44.18 |
| KRH64596 | Soybean | cytosol | 48.41 | 44.18 |
| Solyc06g035530.2.1 | Tomato | cytosol | 47.54 | 44.09 |
| Solyc06g050110.1.1 | Tomato | cytosol | 46.09 | 43.8 |
| Solyc01g093980.2.1 | Tomato | cytosol | 44.93 | 42.58 |
| Solyc09g009110.2.1 | Tomato | cytosol | 45.8 | 41.8 |
| Zm00001d042611_P001 | Maize | cytosol | 46.67 | 41.71 |
| Solyc10g045690.1.1 | Tomato | cytosol, nucleus, peroxisome | 22.9 | 41.58 |
| Solyc10g045770.1.1 | Tomato | cytosol | 13.04 | 41.28 |
| Os01t0883800-02 | Rice | cytosol | 45.8 | 40.62 |
| CDY71240 | Canola | cytosol, peroxisome, plastid | 31.01 | 40.07 |
| HORVU3Hr1G090980.3 | Barley | plastid | 46.96 | 39.13 |
| TraesCS3B01G439900.1 | Wheat | plastid | 47.54 | 38.95 |
| Bra014019.1-P | Field mustard | cytosol | 40.29 | 38.94 |
| TraesCS1A01G263600.1 | Wheat | cytosol | 44.64 | 38.6 |
| TraesCS1B01G274200.1 | Wheat | cytosol | 44.64 | 37.38 |
| TraesCS1D01G263700.1 | Wheat | cytosol | 44.64 | 37.38 |
| TraesCS3D01G401400.1 | Wheat | plastid | 46.96 | 37.16 |
| AT1G44090.1 | Thale cress | mitochondrion | 41.45 | 37.14 |
| TraesCS3A01G406200.1 | Wheat | plastid | 46.96 | 36.65 |
| Os05t0421900-00 | Rice | cytosol | 42.9 | 36.27 |
| OQU87995 | Sorghum | plastid | 46.38 | 36.2 |
| Solyc09g018420.1.1 | Tomato | cytosol | 10.43 | 34.62 |
| CDY70184 | Canola | cytosol | 32.46 | 34.36 |
| Zm00001d012212_P001 | Maize | plastid | 46.09 | 34.34 |
| Solyc09g042210.1.1 | Tomato | cytosol, mitochondrion, nucleus, peroxisome | 12.46 | 33.08 |
| CDY36334 | Canola | cytosol | 11.01 | 31.15 |
| HORVU1Hr1G063780.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 37.1 | 30.77 |
| Solyc10g046820.1.1 | Tomato | cytosol, nucleus, peroxisome | 15.94 | 27.92 |
| Solyc01g108880.2.1 | Tomato | cytosol, extracellular | 27.25 | 26.86 |
| Solyc12g013780.1.1 | Tomato | cytosol | 28.7 | 26.54 |
| Solyc01g108860.2.1 | Tomato | cytosol | 26.09 | 25.64 |
| OQU78027 | Sorghum | cytosol | 36.81 | 25.5 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | UniProt:K4D6E0 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF129 | SUPFAM:SSF51197 | EnsemblPlantsGene:Solyc11g013360.1 |
| EnsemblPlants:Solyc11g013360.1.1 | UniParc:UPI000276A439 | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:6347451..6350521
Molecular Weight (calculated)
39034.0 Da
IEP (calculated)
6.868
GRAVY (calculated)
-0.167
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSALVGGI QISGSSPDKE KILLGLSPPN GSYTMDPFHQ QTNTPKEFIY LKEDSIQAQE ELNEPIIDLI GDINSVSMLV KTACLNHGFF QVINHGVDSQ
101: LINMAHAHVN HFFKLPLEVK LKVQKQHGSL WGYSSAHAER FTSRLPWKET LSFNFHENCG SNKGGIVVDF FESSLGKEFE QMGLVFERYC KEMKRVGLTI
201: MEILGISLGL EKCYYKEFFK DTSSIMRCNF YPTCQDPNLV FGTPPHCDFN SFTILHQDQV GGLEVFVDNK WKSIQPRHDA LVINIGDTFT ALSNGIYKSC
301: LHRAIVKRQV ERISLAFFLC PKEDKVIVPP QHLLVSNSRI YPDFT
101: LINMAHAHVN HFFKLPLEVK LKVQKQHGSL WGYSSAHAER FTSRLPWKET LSFNFHENCG SNKGGIVVDF FESSLGKEFE QMGLVFERYC KEMKRVGLTI
201: MEILGISLGL EKCYYKEFFK DTSSIMRCNF YPTCQDPNLV FGTPPHCDFN SFTILHQDQV GGLEVFVDNK WKSIQPRHDA LVINIGDTFT ALSNGIYKSC
301: LHRAIVKRQV ERISLAFFLC PKEDKVIVPP QHLLVSNSRI YPDFT
001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
Arabidopsis Description
GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.