Factsheet for Bra014019.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36334	Canola	cytosol	30.53	89.34
CDY70184	Canola	cytosol	77.59	84.97
AT1G44090.1	Thale cress	mitochondrion	85.43	79.22
GSMUA_Achr6P25910_001	Banana	cytosol	44.26	50.16
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	44.26	48.47
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	43.7	47.85
GSMUA_Achr4P16380_001	Banana	cytosol	50.98	47.77
VIT_18s0001g01390.t01	Wine grape	cytosol	50.42	47.62
Bra005927.1-P	Field mustard	cytosol	41.46	45.4
VIT_04s0044g01650.t01	Wine grape	cytosol	47.9	45.36
Bra028706.1-P	Field mustard	cytosol	47.9	45.12
Zm00001d042611_P001	Maize	cytosol	48.74	45.08
Bra019165.1-P	Field mustard	cytosol	43.98	44.86
Bra009285.1-P	Field mustard	cytosol	47.62	44.85
KRH18058	Soybean	cytosol	47.06	44.8
KRH16465	Soybean	cytosol, nucleus, peroxisome	47.06	44.68
Os01t0883800-02	Rice	cytosol	48.46	44.47
KRH64020	Soybean	cytosol	48.74	44.39
KRH53918	Soybean	cytosol, nucleus, peroxisome	46.78	44.06
Bra010064.1-P	Field mustard	cytosol	46.5	44.03
GSMUA_Achr11P...	Banana	cytosol	45.94	43.5
Bra027106.1-P	Field mustard	cytosol	45.1	42.82
KRH53327	Soybean	cytosol	43.7	42.62
KRH64596	Soybean	cytosol	44.82	42.33
HORVU3Hr1G090980.3	Barley	plastid	48.46	41.79
Bra022565.1-P	Field mustard	cytosol	43.98	41.64
TraesCS1A01G263600.1	Wheat	cytosol	46.5	41.6
Bra013890.1-P	Field mustard	cytosol	43.7	41.49
VIT_04s0044g01520.t01	Wine grape	cytosol	43.14	41.07
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	43.7	41.05
TraesCS1D01G263700.1	Wheat	cytosol	47.34	41.02
Os05t0421900-00	Rice	cytosol	46.78	40.93
Bra039251.1-P	Field mustard	cytosol	42.86	40.91
TraesCS3B01G439900.1	Wheat	plastid	48.18	40.86
TraesCS1B01G274200.1	Wheat	cytosol	46.78	40.53
Solyc11g013360.1.1	Tomato	cytosol	38.94	40.29
Bra031467.1-P	Field mustard	cytosol	42.3	40.05
TraesCS3D01G401400.1	Wheat	plastid	48.74	39.91
TraesCS3A01G406200.1	Wheat	plastid	49.02	39.59
OQU87995	Sorghum	plastid	48.74	39.37
Zm00001d012212_P001	Maize	plastid	47.9	36.93
HORVU1Hr1G063780.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	36.41	31.25
OQU78027	Sorghum	cytosol	40.34	28.92
Bra022377.1-P	Field mustard	cytosol	28.01	28.41
Bra022378.1-P	Field mustard	cytosol	27.17	27.79
Bra001729.1-P	Field mustard	nucleus	23.53	14.56

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra014019	EnsemblPlants:Bra014019.1	EnsemblPlants:Bra014019.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4DC07
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF368	SUPFAM:SSF51197	UniParc:UPI0002546CD9	SEG:seg	:	:

Description

AT1G44090 (E=2e-179) ATGA20OX5, GA2OX5 | ATGA20OX5 (ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 5); gibberellin 20-oxidase

Coordinates

chrA08:+:4520615..4522790

Molecular Weight (calculated)

40203.7 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.421

Length

357 amino acids

Sequence
(BLAST)

001: MNSSDVNFSL LQSQPNIPPE FFWPENDLTP SEGDLNLPII DMSGFLNGDE AETQRAAKAV REACMTHGTF LVINHGFKSG LAEKALDISS LFFGLPKDEK
101: LKAYRTPGNI SGYTAGHSQR FSSNLPWSET LTLAFKKGPP QVVEDFLTSK LGDRRQEIGQ VFQEFSETMN RLNLELMELL GISMGLKDRT YFRRFFEDGN
201: AIFRCNYYPP CKQPEKALGV GPHNDPTAIT VLLQDDVVGL EVFASGKWQT VRPRPGALVV NVGDTFMALS NGNYKSCFHR AVVNMEKVRR SLVYFSCPRE
301: DKLIIPPPEL VEGGETSRKY PNFTWHQLQR FTQSGYRVDN TTLEKFSSWI ASDSSKN

Best Arabidopsis Sequence Match ( AT1G44090.1 )
(BLAST)

001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST

Arabidopsis Description

GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.