Factsheet for Bra010064.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00263	Canola	cytosol, nucleus, peroxisome	74.01	100.0
Bra009285.1-P	Field mustard	cytosol	63.13	62.8
Bra028706.1-P	Field mustard	cytosol	62.07	61.74
Bra005927.1-P	Field mustard	cytosol	51.99	60.12
Bra019165.1-P	Field mustard	cytosol	54.91	59.14
Bra027106.1-P	Field mustard	cytosol	57.29	57.45
Bra039251.1-P	Field mustard	cytosol	56.23	56.68
Bra022565.1-P	Field mustard	cytosol	55.7	55.7
Bra031467.1-P	Field mustard	cytosol	55.17	55.17
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	54.64	54.21
Bra013890.1-P	Field mustard	cytosol	53.58	53.72
VIT_15s0048g01320.t01	Wine grape	cytosol	53.58	52.6
KRH65199	Soybean	cytosol	53.05	52.36
Solyc01g093980.2.1	Tomato	cytosol	50.4	52.2
TraesCS5D01G566200.1	Wheat	cytosol, peroxisome, plastid	49.6	51.8
TraesCS4A01G319100.1	Wheat	cytosol, peroxisome, plastid	50.13	51.78
PGSC0003DMT400000036	Potato	cytosol	50.13	51.78
KRH48309	Soybean	cytosol	54.11	51.52
TraesCS5B01G560300.1	Wheat	cytosol, peroxisome, plastid	50.13	51.5
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	41.91	51.3
HORVU5Hr1G124120.1	Barley	cytosol	48.54	50.83
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	42.18	50.8
Os03t0856700-02	Rice	cytosol, mitochondrion	49.07	49.73
EER90481	Sorghum	cytosol	49.34	49.08
TraesCS3A01G399800.1	Wheat	cytosol	45.36	47.77
HORVU3Hr1G089980.2	Barley	cytosol	44.83	47.34
TraesCS3D01G393900.1	Wheat	cytosol	44.56	47.19
GSMUA_AchrUn_...	Banana	cytosol	40.32	47.06
TraesCS3B01G432800.1	Wheat	cytosol	44.83	46.94
Os07t0169700-01	Rice	plasma membrane	45.36	46.59
TraesCS3D01G394000.1	Wheat	cytosol, peroxisome, plastid	44.3	46.52
Bra014019.1-P	Field mustard	cytosol	44.03	46.5
EER95912	Sorghum	cytosol	46.15	45.55
Zm00001d034898_P001	Maize	plastid	48.28	45.05
Zm00001d007894_P001	Maize	cytosol	44.83	42.89
Bra022378.1-P	Field mustard	cytosol	27.06	29.23
Bra022377.1-P	Field mustard	cytosol	26.26	28.12
Bra001729.1-P	Field mustard	nucleus	24.93	16.29

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra010064	EnsemblPlants:Bra010064.1	EnsemblPlants:Bra010064.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4D0R5
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF140	SUPFAM:SSF51197	UniParc:UPI000253F676	:	:	:

Description

AT5G07200 (E=3e-141) YAP169, GA20OX3, ATGA20OX3 | YAP169; gibberellin 20-oxidase

Coordinates

chrA06:+:19072551..19074451

Molecular Weight (calculated)

43070.0 Da

IEP (calculated)

7.234

GRAVY (calculated)

-0.467

Length

377 amino acids

Sequence
(BLAST)

001: MSSITNLPHA GFDAKVLNNQ PSNIPSEYVW SDEDKPSTDI KELQIPILDI SSFLSGQDNH VAISQASRLA SEAAKLHGFF LVTNHGVQEG ILARAYKCMG
101: TFFYLPASEK QKAKRKWGEI SGYADSFAGR FYSELPWKET LTFRFSAEEK LRSGTETVKD YVSKTMGDGN EEFGTVFQEY SEAMNTLSLN IIEFLGMSLG
201: IERRYMREFY RDNDSILRLN YYPPCKQPNH TLGTGPHTDP TSLTILYQDH VGGLQVYVEN QWRSIAPKPQ SFVVNIGDTF VALTNGIYRS CLHRAVVNRD
301: RERMTLAFFL CPQMDKVVKP PKELLEVSGQ RLYPNFTWSM FLEFTQKNYR SDKNTLQKFS DWLRSKEVID NKLAGQS

Best Arabidopsis Sequence Match ( AT1G44090.1 )
(BLAST)

001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST

Arabidopsis Description

GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.