Factsheet for Bra028277.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00499	Canola	cytosol, nucleus, peroxisome	100.0	100.0
AT5G51810.1	Thale cress	cytosol, nucleus, peroxisome	88.95	89.42
Bra022565.1-P	Field mustard	cytosol	88.42	89.12
Bra019165.1-P	Field mustard	cytosol	66.32	72.0
Bra013890.1-P	Field mustard	cytosol	70.53	71.28
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	49.74	61.36
VIT_15s0048g01320.t01	Wine grape	cytosol	61.58	60.94
Bra005927.1-P	Field mustard	cytosol	52.11	60.74
Bra009285.1-P	Field mustard	cytosol	60.26	60.42
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	49.74	60.38
Bra028706.1-P	Field mustard	cytosol	59.47	59.63
Solyc01g093980.2.1	Tomato	cytosol	57.11	59.62
PGSC0003DMT400000036	Potato	cytosol	56.84	59.18
TraesCS5D01G566200.1	Wheat	cytosol, peroxisome, plastid	55.53	58.45
TraesCS4A01G319100.1	Wheat	cytosol, peroxisome, plastid	55.53	57.81
TraesCS5B01G560300.1	Wheat	cytosol, peroxisome, plastid	55.53	57.49
HORVU5Hr1G124120.1	Barley	cytosol	54.21	57.22
KRH65199	Soybean	cytosol	57.11	56.81
Bra027106.1-P	Field mustard	cytosol	55.79	56.38
KRH48309	Soybean	cytosol	57.89	55.56
GSMUA_AchrUn_...	Banana	cytosol	47.11	55.42
Bra010064.1-P	Field mustard	cytosol	54.21	54.64
Bra039251.1-P	Field mustard	cytosol	53.68	54.55
EER90481	Sorghum	cytosol	54.21	54.35
Bra031467.1-P	Field mustard	cytosol	52.89	53.32
Os03t0856700-02	Rice	cytosol, mitochondrion	51.58	52.69
TraesCS3D01G394000.1	Wheat	cytosol, peroxisome, plastid	48.42	51.25
TraesCS3A01G399800.1	Wheat	cytosol	48.16	51.12
HORVU3Hr1G089980.2	Barley	cytosol	47.89	50.98
TraesCS3D01G393900.1	Wheat	cytosol	47.63	50.84
TraesCS3B01G432800.1	Wheat	cytosol	48.16	50.83
Zm00001d034898_P001	Maize	plastid	53.95	50.74
Os07t0169700-01	Rice	plasma membrane	48.16	49.86
EER95912	Sorghum	cytosol	47.89	47.64
Zm00001d007894_P001	Maize	cytosol	47.11	45.43
Bra014019.1-P	Field mustard	cytosol	41.05	43.7
Bra022378.1-P	Field mustard	cytosol	27.37	29.8
Bra022377.1-P	Field mustard	cytosol	25.53	27.56
Bra001729.1-P	Field mustard	nucleus	24.74	16.29

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra028277	EnsemblPlants:Bra028277.1	EnsemblPlants:Bra028277.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4EHL2
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF140	SUPFAM:SSF51197	UniParc:UPI0002543BAC	SEG:seg	:	:

Description

AT5G51810 (E=6e-181) GA20OX2, AT2353, ATGA20OX2 | GA20OX2 (GIBBERELLIN 20 OXIDASE 2); gibberellin 20-oxidase

Coordinates

chrA01:+:19033282..19034679

Molecular Weight (calculated)

43295.4 Da

IEP (calculated)

5.628

GRAVY (calculated)

-0.366

Length

380 amino acids

Sequence
(BLAST)

001: MAIICTTPTT SPAEKEQEPK QDLENDQTPP LIFNPSLLNV QSQIPNQFIW PDKEKPSIDI PELNVPFIDL SSQDTTLEAS RLIAEACTKH GFFLVVNHGV
101: SESLISDAHR YMESFFDMPL AGKQRAQRKP GESWGYASSF TGRFSTKLPW KETLSFPFSN EISGSRTVQD YFSGTLGQEF EQFGRVYQNY CEAMSSLSLE
201: IMELLGLSLG IKTDHFREFF EENDSIMRLN HYPPCQTPDL TLGTGPHCDP SSLTILHQDQ VNGLQVFVEN QWQSILPNPK AFVVNIGDTF MALSNGIFKS
301: CLHRAVVNRE SARTSMAFFL CPKKDKVVKP PSKILEKMTP RRYPDFTWPM FLEFTQKHYR ADVNTLDSFT NWIITNKFTV

Best Arabidopsis Sequence Match ( AT5G51810.1 )
(BLAST)

001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI

Arabidopsis Description

GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.