Factsheet for Bra022378.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92296	Canola	cytosol, nucleus, peroxisome	99.71	99.71
CDY69351	Canola	cytosol, peroxisome	63.32	97.79
CDX99287	Canola	cytoskeleton, cytosol, peroxisome	97.42	97.7
AT3G19010.1	Thale cress	cytoskeleton, cytosol, peroxisome	90.26	90.26
Bra022377.1-P	Field mustard	cytosol	61.32	60.8
KRH49793	Soybean	cytosol	57.31	58.31
VIT_03s0063g01340.t01	Wine grape	cytosol	56.45	56.77
KRG89226	Soybean	cytosol	57.59	55.22
GSMUA_Achr7P08230_001	Banana	cytosol	49.28	53.25
GSMUA_Achr7P08240_001	Banana	cytosol	47.85	53.18
TraesCS4D01G079900.1	Wheat	cytosol	50.14	50.29
TraesCS4A01G234100.1	Wheat	cytosol	50.14	50.29
TraesCS4B01G081200.1	Wheat	cytosol	49.86	50.0
OQU91363	Sorghum	cytosol	50.43	49.44
Os03t0618300-01	Rice	cytosol	49.86	49.43
Zm00001d033327_P001	Maize	cytosol	42.69	48.38
KXG38014	Sorghum	cytosol	46.99	47.54
EER91221	Sorghum	cytosol	45.85	46.65
HORVU4Hr1G013840.1	Barley	cytosol	50.14	45.45
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	33.52	43.82
Zm00001d013725_P002	Maize	cytosol	40.69	38.27
Bra001729.1-P	Field mustard	nucleus	53.01	32.06
Bra019165.1-P	Field mustard	cytosol	30.66	30.57
Bra005927.1-P	Field mustard	cytosol	26.65	28.53
Bra009285.1-P	Field mustard	cytosol	30.66	28.23
Bra028706.1-P	Field mustard	cytosol	30.66	28.23
Bra022565.1-P	Field mustard	cytosol	30.37	28.12
Bra039251.1-P	Field mustard	cytosol	30.09	28.07
Bra031467.1-P	Field mustard	cytosol	30.09	27.85
Bra013890.1-P	Field mustard	cytosol	29.8	27.66
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	29.8	27.37
Bra014019.1-P	Field mustard	cytosol	27.79	27.17
Bra010064.1-P	Field mustard	cytosol	29.23	27.06
Bra027106.1-P	Field mustard	cytosol	28.65	26.6

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EnsemblPlantsGene:Bra022378	EnsemblPlants:Bra022378.1	EnsemblPlants:Bra022378.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4E0T1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF127	SUPFAM:SSF51197	UniParc:UPI0002547F80	SEG:seg	:	:

Description

AT3G19010 (E=2e-177) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA05:+:18085618..18087255

Molecular Weight (calculated)

40637.0 Da

IEP (calculated)

4.939

GRAVY (calculated)

-0.593

Length

349 amino acids

Sequence
(BLAST)

001: MEDLDQTFIQ APEHRADSNS IPNQPEEIPV IDLSRLNDPE DIQNVISEIG DACETWGFFQ VINHGVPCDT RKRVEETVKI FFDLPMEEKI KVKRDEVNPA
101: GYHDGEHTKN VRDWKEVFDI YFKDPMVMPS STDPEDEGLR VVYNKWPQFP SDYREACQEY AGHAEKLAFR LLELISLSLG LPKERFHDYF KEQMSFFRIN
201: RYPPCPRPDL ALGVGHHKDA DVISLLAQDD VGGLQISRRS DGVWFPIRPV PNALVINIGN CMEVWTNDKY WSAEHRVVVN STRERYSIPF FLLPSHDVEV
301: KPLEELLSPE NPPRYKGYKY GKFYVSRNRS DFKKLEIQNI QIDDFKVVT

Best Arabidopsis Sequence Match ( AT3G19010.4 )
(BLAST)

001: MEDLDPTYIQ APEHRSDSNF IPNQPEEIPV IDLSRLDDPE DVQNVISEIG DACEKWGFFQ VLNHGVPSDA RQRVEKTVKM FFDLPMEEKI KVKRDDVNPV
101: GYHDGEHTKN VKDWKEVFDI YFKDPMVIPS TTDPEDEGLR LVYNKWPQSP SDFREACEVY ARHAEKLAFK LLELISLSLG LPKERFHDYF KEQMSFFRIN
201: RYPPCPRPDL ALGVGHHKDA DVISLLAQDD VGGLQVSRRS DGVWFPIRPV PNALVINIGN CMEIWTNDKY WSAEHRVVVN TTRERYSIPF FLLPSHDVEV
301: KPLEELVSPE NPPKYKGYKW GKFYVSRNRS DFRKLEIENI QIDDFKVKT

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ65]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.