Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G079900.1 | Wheat | cytosol | 96.84 | 96.84 |
| TraesCS4B01G081200.1 | Wheat | cytosol | 95.69 | 95.69 |
| HORVU4Hr1G013840.1 | Barley | cytosol | 93.1 | 84.16 |
| Os03t0618300-01 | Rice | cytosol | 84.48 | 83.52 |
| OQU91363 | Sorghum | cytosol | 83.62 | 81.74 |
| EER91221 | Sorghum | cytosol | 75.86 | 76.97 |
| Zm00001d033327_P001 | Maize | cytosol | 64.66 | 73.05 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 54.02 | 70.41 |
| KXG38014 | Sorghum | cytosol | 69.25 | 69.86 |
| GSMUA_Achr7P08230_001 | Banana | cytosol | 60.34 | 65.02 |
| GSMUA_Achr7P08240_001 | Banana | cytosol | 58.05 | 64.33 |
| Zm00001d013725_P002 | Maize | cytosol | 64.66 | 60.65 |
| VIT_03s0063g01150.t01 | Wine grape | cytosol | 57.47 | 58.48 |
| VIT_03s0063g01250.t01 | Wine grape | cytosol | 31.61 | 58.2 |
| VIT_03s0063g01160.t01 | Wine grape | cytosol | 44.54 | 57.2 |
| VIT_03s0063g01260.t01 | Wine grape | cytosol | 56.03 | 57.02 |
| VIT_03s0063g01210.t01 | Wine grape | cytosol | 55.46 | 56.43 |
| VIT_03s0063g01340.t01 | Wine grape | cytosol | 56.03 | 56.2 |
| Solyc01g108880.2.1 | Tomato | cytosol, extracellular | 56.03 | 55.71 |
| PGSC0003DMT400066716 | Potato | cytosol | 56.61 | 55.65 |
| VIT_03s0063g01290.t01 | Wine grape | cytosol | 54.02 | 54.97 |
| VIT_03s0063g01330.t01 | Wine grape | cytosol | 48.85 | 54.49 |
| AT3G19000.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 52.87 | 52.27 |
| VIT_03s0063g01280.t01 | Wine grape | cytosol | 37.07 | 52.23 |
| CDX99288 | Canola | cytosol | 52.3 | 51.7 |
| Bra022377.1-P | Field mustard | cytosol | 52.3 | 51.7 |
| CDX92294 | Canola | cytosol | 52.01 | 51.42 |
| CDY22994 | Canola | cytosol | 52.01 | 51.27 |
| CDX82317 | Canola | cytosol | 52.01 | 51.27 |
| CDX82318 | Canola | cytosol | 52.01 | 51.27 |
| CDY22995 | Canola | cytosol | 52.01 | 51.27 |
| KRH49793 | Soybean | cytosol | 50.29 | 51.02 |
| CDY69351 | Canola | cytosol, peroxisome | 33.05 | 50.88 |
| Bra022378.1-P | Field mustard | cytosol | 50.29 | 50.14 |
| VIT_03s0063g01180.t01 | Wine grape | cytosol | 56.61 | 50.13 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 50.0 | 49.86 |
| CDX99287 | Canola | cytoskeleton, cytosol, peroxisome | 49.71 | 49.71 |
| AT3G19010.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 49.71 | 49.57 |
| KRG89226 | Soybean | cytosol | 51.15 | 48.9 |
| PGSC0003DMT400066714 | Potato | cytosol | 46.84 | 46.44 |
| Solyc01g108860.2.1 | Tomato | cytosol | 46.55 | 46.15 |
| PGSC0003DMT400066712 | Potato | cytosol | 17.53 | 38.61 |
| VIT_03s0063g01310.t01 | Wine grape | cytosol | 52.59 | 31.02 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 31.32 | 30.45 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 29.31 | 27.95 |
| Bra001729.1-P | Field mustard | nucleus | 46.26 | 27.9 |
| TraesCS1A01G263600.1 | Wheat | cytosol | 31.61 | 27.57 |
| TraesCS3A01G406200.1 | Wheat | plastid | 31.32 | 24.66 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF98 | SUPFAM:SSF51197 | EnsemblPlantsGene:TraesCS4A01G234100 | EnsemblPlants:TraesCS4A01G234100.1 | SEG:seg |
Description
No Description!
Coordinates
chr4A:+:543332002..543333307
Molecular Weight (calculated)
39355.3 Da
IEP (calculated)
5.008
GRAVY (calculated)
-0.470
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGLSMDQAF VQAPEHRTKA NLADADGIPV IDLSPLAAGD KAGVDALAAE VGRASQDWGF FVVVRHGVLA ETVARALEAQ RAFFALPADR KAAVRRDEAA
101: PLGYYESEHT KNVRDWKEVF DLVPREPPPP AAVADGELVF ENKWPEDLPR FREALEEYAE AMEELAFKLL ELIARSLGLR PDRLRCFFKD QTTFIRLNHY
201: PPCPSPDLAL GVGRHKDAGA LTILYQDDVG GLDVRRRSDG EWVRVRPVPD SYVINVGDII QVWSNDRYES AEHRVSVNSQ KERFSMPYFF NPGSDAMVEP
301: LEEMVSDERP ARYDAYNWGN FFSTRKNSNF RKLDVENVQI AHFRKDRS
101: PLGYYESEHT KNVRDWKEVF DLVPREPPPP AAVADGELVF ENKWPEDLPR FREALEEYAE AMEELAFKLL ELIARSLGLR PDRLRCFFKD QTTFIRLNHY
201: PPCPSPDLAL GVGRHKDAGA LTILYQDDVG GLDVRRRSDG EWVRVRPVPD SYVINVGDII QVWSNDRYES AEHRVSVNSQ KERFSMPYFF NPGSDAMVEP
301: LEEMVSDERP ARYDAYNWGN FFSTRKNSNF RKLDVENVQI AHFRKDRS
001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.