Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU91363 Sorghum cytosol 81.92 78.93
TraesCS4D01G079900.1 Wheat cytosol 77.55 76.44
TraesCS4A01G234100.1 Wheat cytosol 76.97 75.86
TraesCS4B01G081200.1 Wheat cytosol 76.68 75.57
Os03t0618300-01 Rice cytosol 75.22 73.3
HORVU4Hr1G013840.1 Barley cytosol 77.55 69.09
KXG38014 Sorghum cytosol 66.76 66.38
Os08t0249900-00 Rice cytosol, nucleus, peroxisome 50.44 64.79
GSMUA_Achr7P08240_001 Banana cytosol 57.43 62.74
GSMUA_Achr7P08230_001 Banana cytosol 57.43 60.99
VIT_03s0063g01160.t01 Wine grape cytosol 42.27 53.51
VIT_03s0063g01150.t01 Wine grape cytosol 53.06 53.22
VIT_03s0063g01340.t01 Wine grape cytosol 53.64 53.03
VIT_03s0063g01210.t01 Wine grape cytosol 52.77 52.92
VIT_03s0063g01260.t01 Wine grape cytosol 52.19 52.34
VIT_03s0063g01290.t01 Wine grape cytosol 51.9 52.05
VIT_03s0063g01330.t01 Wine grape cytosol 46.36 50.96
Solyc01g108880.2.1 Tomato cytosol, extracellular 51.6 50.57
VIT_03s0063g01280.t01 Wine grape cytosol 35.86 49.8
VIT_03s0063g01250.t01 Wine grape cytosol 27.41 49.74
PGSC0003DMT400066716 Potato cytosol 51.31 49.72
AT3G19000.1 Thale cress cytoskeleton, cytosol, peroxisome 50.44 49.15
KRH49793 Soybean cytosol 48.98 48.98
CDX92294 Canola cytosol 50.15 48.86
CDX99288 Canola cytosol 49.85 48.58
Bra022377.1-P Field mustard cytosol 49.85 48.58
CDY22995 Canola cytosol 48.98 47.59
CDX82317 Canola cytosol 48.98 47.59
CDX82318 Canola cytosol 48.98 47.59
CDY22994 Canola cytosol 48.98 47.59
KRG89226 Soybean cytosol 49.85 46.98
CDY69351 Canola cytosol, peroxisome 30.9 46.9
Bra022378.1-P Field mustard cytosol 46.65 45.85
VIT_03s0063g01180.t01 Wine grape cytosol 52.48 45.8
CDX92296 Canola cytosol, nucleus, peroxisome 46.36 45.56
CDX99287 Canola cytoskeleton, cytosol, peroxisome 46.06 45.4
AT3G19010.1 Thale cress cytoskeleton, cytosol, peroxisome 46.06 45.27
PGSC0003DMT400066714 Potato cytosol 44.31 43.3
Solyc01g108860.2.1 Tomato cytosol 44.02 43.02
PGSC0003DMT400066712 Potato cytosol 18.08 39.24
VIT_03s0063g01310.t01 Wine grape cytosol 49.85 28.98
EER95912 Sorghum cytosol 32.07 28.8
EER90481 Sorghum cytosol 29.45 26.65
Bra001729.1-P Field mustard nucleus 42.86 25.48
OQU87995 Sorghum plastid 32.07 24.89
OQU78027 Sorghum cytosol 25.07 17.27
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8062260UniProt:C5WSA4ncoils:CoilInterPro:DIOX_N
EnsemblPlants:EER91221ProteinID:EER91221ProteinID:EER91221.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PRINTS:PR00682
PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF98EnsemblPlantsGene:SORBI_3001G166300SUPFAM:SSF51197UniParc:UPI0001A821A2
RefSeq:XP_002464223.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:13831583..13834521
Molecular Weight (calculated)
38380.1 Da
IEP (calculated)
5.187
GRAVY (calculated)
-0.428
Length
343 amino acids
Sequence
(BLAST)
001: MGGLTMEPAF VQAPEHRPKP TVTEATGIPV TDVDALAAEV GAASRDWGFF VVVGHGVPAG TVARATAAQR AFFALPAERK AAVRRSEAEP LGYYESEHTK
101: NVRDWKEVFD LVPRDPPPPA AVADGEVVYR NKWPEDLPGF REALEEYTNA LEELALKLLE LLARSLKLRP DRLHGFFKEH TSFFRLNHYP PCPAPEVVLG
201: VGRHKDPGAL TVLYQDDVGG LDVRRRSDGE WVRVKCVPNS FVINVGDTVQ VWSDDRYESA EHRVSVNSEK ERFSMPYFFN PASGAIVEPL EEVVSEEKKP
301: PRYSAYSWGD YFSTKLNGNF KWLDVDNLQI ADFRKSYSSG DVP
Best Arabidopsis Sequence Match ( AT3G19000.1 )
(BLAST)
001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.