Factsheet for GSMUA_Achr7P08230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08240_001	Banana	cytosol	91.64	94.27
VIT_03s0063g01160.t01	Wine grape	cytosol	52.32	62.36
Os03t0618300-01	Rice	cytosol	67.18	61.65
VIT_03s0063g01150.t01	Wine grape	cytosol	65.02	61.4
TraesCS4D01G079900.1	Wheat	cytosol	65.94	61.21
OQU91363	Sorghum	cytosol	66.87	60.67
TraesCS4B01G081200.1	Wheat	cytosol	65.02	60.34
TraesCS4A01G234100.1	Wheat	cytosol	65.02	60.34
Zm00001d033327_P001	Maize	cytosol	56.97	59.74
VIT_03s0063g01260.t01	Wine grape	cytosol	62.85	59.36
VIT_03s0063g01210.t01	Wine grape	cytosol	62.23	58.77
VIT_03s0063g01250.t01	Wine grape	cytosol	33.75	57.67
VIT_03s0063g01290.t01	Wine grape	cytosol	60.99	57.6
EER91221	Sorghum	cytosol	60.99	57.43
KRH49793	Soybean	cytosol	60.37	56.85
VIT_03s0063g01330.t01	Wine grape	cytosol	54.8	56.73
KXG38014	Sorghum	cytosol	60.37	56.52
Solyc01g108880.2.1	Tomato	cytosol, extracellular	60.06	55.43
PGSC0003DMT400066716	Potato	cytosol	60.68	55.37
VIT_03s0063g01340.t01	Wine grape	cytosol	59.44	55.33
HORVU4Hr1G013840.1	Barley	cytosol	65.63	55.06
VIT_03s0063g01280.t01	Wine grape	cytosol	42.11	55.06
CDY69351	Canola	cytosol, peroxisome	37.77	53.98
KRG89226	Soybean	cytosol	59.44	52.75
AT3G19000.1	Thale cress	cytoskeleton, cytosol, peroxisome	57.28	52.56
CDX92294	Canola	cytosol	57.28	52.56
VIT_03s0063g01180.t01	Wine grape	cytosol	63.78	52.42
Bra022377.1-P	Field mustard	cytosol	56.97	52.27
CDX99288	Canola	cytosol	56.97	52.27
CDY22995	Canola	cytosol	56.66	51.84
CDX82318	Canola	cytosol	56.66	51.84
CDY22994	Canola	cytosol	56.35	51.56
CDX82317	Canola	cytosol	56.35	51.56
CDX99287	Canola	cytoskeleton, cytosol, peroxisome	53.87	50.0
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	41.18	49.81
Bra022378.1-P	Field mustard	cytosol	53.25	49.28
CDX92296	Canola	cytosol, nucleus, peroxisome	53.25	49.28
AT3G19010.1	Thale cress	cytoskeleton, cytosol, peroxisome	52.94	49.0
Solyc01g108860.2.1	Tomato	cytosol	52.94	48.72
PGSC0003DMT400066714	Potato	cytosol	52.63	48.43
Zm00001d013725_P002	Maize	cytosol	53.56	46.63
PGSC0003DMT400066712	Potato	cytosol	18.27	37.34
VIT_03s0063g01310.t01	Wine grape	cytosol	59.75	32.71
Bra001729.1-P	Field mustard	nucleus	48.3	27.04
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	24.46	25.24
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	23.53	24.68
GSMUA_Achr4P16380_001	Banana	cytosol	28.79	24.41
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	24.46	24.23
GSMUA_AchrUn_...	Banana	cytosol	24.15	24.15
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	24.15	23.93
GSMUA_Achr6P25910_001	Banana	cytosol	23.22	23.81
GSMUA_Achr11P...	Banana	cytosol	24.46	20.95

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G08230_001
EnsemblPlants:GSMUA_Achr7P08230_001	EnsemblPlants:GSMUA_Achr7T08230_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0TFR3
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF98
SUPFAM:SSF51197	UniParc:UPI000295270F	SEG:seg	:	:	:

Description

gibberellin 20 oxidase 2, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G08230_001]

Coordinates

chr7:+:6140804..6142227

Molecular Weight (calculated)

36923.9 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.422

Length

323 amino acids

Sequence
(BLAST)

001: MVLEFDPAFI QAPEHRPKPA VAEAGSIPLI DLSPLHLLEQ HGGPLVEGLE VGFFALPPEE RRRVRRDEVN PLGYYEAENT KNVRDWKEVF DFVVHERAVI
101: PSPGDAGGGV DRLIELRNQW PQLPHGFREA LVEYAQATEE LAFTLLELIS LTLSLPPKRL HGFFKDQTSF IRLNHYPPCP SPHLALGVGR HKDSGALTIL
201: AQDDVGGLDV RRRSDGEWVR VKPIPNSFII NVGDIVQVWS NDKYESAEHR VSVNSERERF SIPFFFNPAH YVMVKPLAEL VDEKNPANYE EFNWGEFFKT
301: RKNSNFKKLD VENIQIYHFK KAK

Best Arabidopsis Sequence Match ( AT3G19000.1 )
(BLAST)

001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.