Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69351 | Canola | cytosol, peroxisome | 63.51 | 97.79 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 97.99 | 97.71 |
| Bra022378.1-P | Field mustard | cytosol | 97.7 | 97.42 |
| AT3G19010.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 89.66 | 89.4 |
| CDY22995 | Canola | cytosol | 62.93 | 62.04 |
| CDX82318 | Canola | cytosol | 62.93 | 62.04 |
| CDY22994 | Canola | cytosol | 62.64 | 61.76 |
| CDX82317 | Canola | cytosol | 62.64 | 61.76 |
| CDX99288 | Canola | cytosol | 62.07 | 61.36 |
| CDX92294 | Canola | cytosol | 61.49 | 60.8 |
| KRH49793 | Soybean | cytosol | 56.9 | 57.73 |
| VIT_03s0063g01340.t01 | Wine grape | cytosol | 56.9 | 57.06 |
| KRG89226 | Soybean | cytosol | 57.47 | 54.95 |
| GSMUA_Achr7P08230_001 | Banana | cytosol | 50.0 | 53.87 |
| GSMUA_Achr7P08240_001 | Banana | cytosol | 48.56 | 53.82 |
| TraesCS4D01G079900.1 | Wheat | cytosol | 49.71 | 49.71 |
| TraesCS4A01G234100.1 | Wheat | cytosol | 49.71 | 49.71 |
| OQU91363 | Sorghum | cytosol | 50.57 | 49.44 |
| TraesCS4B01G081200.1 | Wheat | cytosol | 49.43 | 49.43 |
| Os03t0618300-01 | Rice | cytosol | 49.71 | 49.15 |
| Zm00001d033327_P001 | Maize | cytosol | 42.53 | 48.05 |
| KXG38014 | Sorghum | cytosol | 46.55 | 46.96 |
| EER91221 | Sorghum | cytosol | 45.4 | 46.06 |
| HORVU4Hr1G013840.1 | Barley | cytosol | 49.71 | 44.94 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 33.05 | 43.07 |
| Zm00001d013725_P002 | Maize | cytosol | 40.23 | 37.74 |
| CDY72226 | Canola | mitochondrion | 23.85 | 32.05 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 31.32 | 31.14 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 24.14 | 30.11 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 31.9 | 28.98 |
| CDY71240 | Canola | cytosol, peroxisome, plastid | 21.84 | 28.46 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 30.46 | 28.19 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 30.46 | 28.04 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 30.46 | 27.97 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 30.17 | 27.93 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 30.46 | 27.89 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 30.17 | 27.85 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 30.17 | 27.63 |
| CDY64867 | Canola | cytosol | 29.6 | 27.54 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 29.89 | 27.51 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 29.89 | 27.44 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 29.6 | 27.25 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 29.6 | 27.18 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 29.6 | 27.18 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 28.74 | 26.39 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 28.74 | 26.25 |
| CDY60083 | Canola | vacuole | 29.6 | 25.62 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 22.41 | 25.16 |
| CDY70184 | Canola | cytosol | 23.28 | 24.85 |
| CDY13228 | Canola | cytosol | 5.17 | 24.32 |
| CDY44829 | Canola | cytosol | 27.3 | 24.3 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 28.45 | 23.4 |
| CDY36334 | Canola | cytosol | 6.9 | 19.67 |
| CDY13227 | Canola | cytosol | 9.2 | 18.71 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078EE01 | EnsemblPlants:CDX99287 | ProteinID:CDX99287 | ProteinID:CDX99287.1 |
| InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00107559001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF127 |
| SUPFAM:SSF51197 | UniParc:UPI0004EEF1E6 | SEG:seg | : | : | : |
Description
BnaC05g34020D
Coordinates
chrLK031909:+:931657..933929
Molecular Weight (calculated)
40548.1 Da
IEP (calculated)
5.327
GRAVY (calculated)
-0.556
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLDQTFIQA PEHRADSNFI PNQPEEIPVI DLSRLNDPEN IQNVISEIGD ACETWGFFQV INHGVPCDAR KRVEETVKIF FDLPMEEKIK VKRDEVNPAG
101: YHDGEHTKNV RDWKEVFDIY FKDPMVMPSS TDPEDEGLRV VYNKWPQFPS DFREACQEYA GHAEKLAFRL LELISLSLGL PKKRFHEYFK EQMSFFRINR
201: YPPCPRPDLA LGVGHHKDAD VISLLAQDEV GGLQISRRSD GVWFPIRPVP NALVINIGNC MEVWTNDKYW SAEHRVVVNS TRERYSIPFF LLPSHDVEVK
301: PLEELLSPEN PPRYKGYKYG KFYVSRNRSD FKKLEIQNIQ IDDFKVVT
101: YHDGEHTKNV RDWKEVFDIY FKDPMVMPSS TDPEDEGLRV VYNKWPQFPS DFREACQEYA GHAEKLAFRL LELISLSLGL PKKRFHEYFK EQMSFFRINR
201: YPPCPRPDLA LGVGHHKDAD VISLLAQDEV GGLQISRRSD GVWFPIRPVP NALVINIGNC MEVWTNDKYW SAEHRVVVNS TRERYSIPFF LLPSHDVEVK
301: PLEELLSPEN PPRYKGYKYG KFYVSRNRSD FKKLEIQNIQ IDDFKVVT
001: MEDLDPTYIQ APEHRSDSNF IPNQPEEIPV IDLSRLDDPE DVQNVISEIG DACEKWGFFQ VLNHGVPSDA RQRVEKTVKM FFDLPMEEKI KVKRDDVNPV
101: GYHDGEHTKN VKDWKEVFDI YFKDPMVIPS TTDPEDEGLR LVYNKWPQSP SDFREACEVY ARHAEKLAFK LLELISLSLG LPKERFHDYF KEQMSFFRIN
201: RYPPCPRPDL ALGVGHHKDA DVISLLAQDD VGGLQVSRRS DGVWFPIRPV PNALVINIGN CMEIWTNDKY WSAEHRVVVN TTRERYSIPF FLLPSHDVEV
301: KPLEELVSPE NPPKYKGYKW GKFYVSRNRS DFRKLEIENI QIDDFKVKT
101: GYHDGEHTKN VKDWKEVFDI YFKDPMVIPS TTDPEDEGLR LVYNKWPQSP SDFREACEVY ARHAEKLAFK LLELISLSLG LPKERFHDYF KEQMSFFRIN
201: RYPPCPRPDL ALGVGHHKDA DVISLLAQDD VGGLQVSRRS DGVWFPIRPV PNALVINIGN CMEIWTNDKY WSAEHRVVVN TTRERYSIPF FLLPSHDVEV
301: KPLEELVSPE NPPKYKGYKW GKFYVSRNRS DFRKLEIENI QIDDFKVKT
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ65]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.