CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27101	Canola	cytosol, nucleus, peroxisome	98.15	98.41
Bra022565.1-P	Field mustard	cytosol	97.62	97.88
AT5G51810.1	Thale cress	cytosol, nucleus, peroxisome	90.21	90.21
CDY72226	Canola	mitochondrion	61.38	89.58
CDX99892	Canola	cytosol, nucleus, peroxisome	89.68	89.45
CDX99893	Canola	cytosol, nucleus, peroxisome	89.68	89.21
CDY00499	Canola	cytosol, nucleus, peroxisome	89.15	88.68
CDY49714	Canola	cytosol, nucleus, peroxisome	69.84	75.43
CDY55723	Canola	cytosol, nucleus, peroxisome	72.22	72.61
CDX92707	Canola	cytosol, nucleus, peroxisome	73.28	72.32
CDX94446	Canola	cytosol, nucleus, peroxisome	71.43	71.81
VIT_15s0048g01320.t01	Wine grape	cytosol	62.96	61.98
CDY00263	Canola	cytosol, nucleus, peroxisome	45.24	61.29
Solyc01g093980.2.1	Tomato	cytosol	58.73	60.99
CDY58871	Canola	cytosol, endoplasmic reticulum, peroxisome	60.85	60.85
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	49.47	60.71
CDX70015	Canola	cytosol, nucleus, peroxisome	60.85	60.69
CDX98998	Canola	cytosol, nucleus, peroxisome	60.85	60.69
CDX81038	Canola	cytosol, nucleus, peroxisome	60.58	60.58
PGSC0003DMT400000036	Potato	cytosol	58.47	60.55
CDY05017	Canola	cytosol, nucleus, peroxisome	60.58	60.42
CDY14054	Canola	cytosol, nucleus, peroxisome	60.32	60.16
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	49.47	59.74
TraesCS5D01G566200.1	Wheat	cytosol, peroxisome, plastid	55.82	58.45
HORVU5Hr1G124120.1	Barley	cytosol	55.56	58.33
KRH65199	Soybean	cytosol	58.73	58.12
TraesCS4A01G319100.1	Wheat	cytosol, peroxisome, plastid	55.82	57.81
TraesCS5B01G560300.1	Wheat	cytosol, peroxisome, plastid	55.82	57.49
KRH48309	Soybean	cytosol	59.52	56.82
CDY52529	Canola	cytosol, nucleus, peroxisome	56.61	56.17
GSMUA_AchrUn_...	Banana	cytosol	47.62	55.73
EER90481	Sorghum	cytosol	55.56	55.41
CDY64867	Canola	cytosol	54.5	55.08
CDY13228	Canola	cytosol	10.58	54.05
Os03t0856700-02	Rice	cytosol, mitochondrion	52.65	53.49
CDY64866	Canola	cytosol, nucleus, peroxisome	43.12	52.58
TraesCS3A01G399800.1	Wheat	cytosol	49.47	52.23
HORVU3Hr1G089980.2	Barley	cytosol	49.21	52.1
TraesCS3D01G394000.1	Wheat	cytosol, peroxisome, plastid	49.47	52.09
Zm00001d034898_P001	Maize	plastid	55.29	51.73
TraesCS3D01G393900.1	Wheat	cytosol	48.41	51.4
TraesCS3B01G432800.1	Wheat	cytosol	48.94	51.39
Os07t0169700-01	Rice	plasma membrane	49.21	50.68
CDY44829	Canola	cytosol	52.12	50.38
CDY12880	Canola	cytosol, nucleus, vacuole	56.35	50.35
CDY60083	Canola	vacuole	53.44	50.25
EER95912	Sorghum	cytosol	48.68	48.17
CDY13227	Canola	cytosol	21.69	47.95
Zm00001d007894_P001	Maize	cytosol	48.41	46.45
CDY71240	Canola	cytosol, peroxisome, plastid	30.16	42.7
CDY70184	Canola	cytosol	31.75	36.81
CDY69351	Canola	cytosol, peroxisome	19.05	31.86
CDX82317	Canola	cytosol	29.37	31.44
CDY22994	Canola	cytosol	29.37	31.44
CDY22995	Canola	cytosol	29.37	31.44
CDX82318	Canola	cytosol	29.37	31.44
CDX92296	Canola	cytosol, nucleus, peroxisome	28.31	30.66
CDX99287	Canola	cytoskeleton, cytosol, peroxisome	28.04	30.46
CDY36334	Canola	cytosol	9.79	30.33
CDX92294	Canola	cytosol	26.72	28.69
CDX99288	Canola	cytosol	26.72	28.69

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	GO:A0A078DT09	EnsemblPlants:CDX91609	ProteinID:CDX91609	ProteinID:CDX91609.1
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00153037001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF140
SUPFAM:SSF51197	UniParc:UPI0004EE7141	:	:	:	:

Description

BnaC02g15510D

Coordinates

chrLK031868:-:946301..947704

Molecular Weight (calculated)

42847.7 Da

IEP (calculated)

5.840

GRAVY (calculated)

-0.381

Length

378 amino acids

Sequence
(BLAST)

001: MAIICTTPTS PAEKEQEPKQ SFENDQTPPI VFNPSLLNLQ SQIPNQFIWP DEEKPSIDIP VLDVPFIDLS SQDSTLEASR LIAEACTQHG FFLVVNHGVS
101: ESLISDAHRL MGSFFDMPLA GKQRAQRKLG ESSGYAGSFT GRFSTKLPWK ETLSFRFSNE NNGSRTVQDY FSCTLGQEFE QFGNVYQEYC EAMSSLSLKI
201: MELLGLSLGV NRDYFRGFFE ENDSIMRLNH YPPCQTPDLT LGTGPHCDPS SLTILHQDHV NGLQVFVDNQ WRSIPPNPKA FVVNIGDTFM ALSNGIFKSC
301: LHRAVVNRES ARKSMAFFLC PKRDKVVKPP SEILDKTPRR YPDFTWPMFL EFTQKHYRAD ANTLDSFSNW VITNKNPI

Best Arabidopsis Sequence Match ( AT5G51810.1 )
(BLAST)

001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI

Arabidopsis Description

GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.