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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022565.1-P Field mustard cytosol 99.47 99.47
CDX91609 Canola cytosol, nucleus, peroxisome 98.41 98.15
AT5G51810.1 Thale cress cytosol, nucleus, peroxisome 90.72 90.48
CDX99892 Canola cytosol, nucleus, peroxisome 90.19 89.71
CDY72226 Canola mitochondrion 61.54 89.58
CDX99893 Canola cytosol, nucleus, peroxisome 90.19 89.47
CDY00499 Canola cytosol, nucleus, peroxisome 89.66 88.95
CDY49714 Canola cytosol, nucleus, peroxisome 70.29 75.71
CDY55723 Canola cytosol, nucleus, peroxisome 72.41 72.61
CDX92707 Canola cytosol, nucleus, peroxisome 73.47 72.32
CDX94446 Canola cytosol, nucleus, peroxisome 71.62 71.81
VIT_15s0048g01320.t01 Wine grape cytosol 63.66 62.5
CDY58871 Canola cytosol, endoplasmic reticulum, peroxisome 61.8 61.64
Solyc01g093980.2.1 Tomato cytosol 59.42 61.54
CDX70015 Canola cytosol, nucleus, peroxisome 61.8 61.48
CDX98998 Canola cytosol, nucleus, peroxisome 61.8 61.48
CDX81038 Canola cytosol, nucleus, peroxisome 61.54 61.38
CDY00263 Canola cytosol, nucleus, peroxisome 45.36 61.29
GSMUA_Achr8P19120_001 Banana cytosol, extracellular, peroxisome 49.87 61.04
PGSC0003DMT400000036 Potato cytosol 58.89 60.82
CDY05017 Canola cytosol, nucleus, peroxisome 61.01 60.69
CDY14054 Canola cytosol, nucleus, peroxisome 60.74 60.42
GSMUA_Achr2P01010_001 Banana cytosol, peroxisome, plastid 49.87 60.06
TraesCS5D01G566200.1 Wheat cytosol, peroxisome, plastid 56.23 58.73
HORVU5Hr1G124120.1 Barley cytosol 55.97 58.61
KRH65199 Soybean cytosol 59.15 58.38
TraesCS4A01G319100.1 Wheat cytosol, peroxisome, plastid 56.23 58.08
TraesCS5B01G560300.1 Wheat cytosol, peroxisome, plastid 56.23 57.77
KRH48309 Soybean cytosol 59.68 56.82
CDY52529 Canola cytosol, nucleus, peroxisome 56.76 56.17
GSMUA_AchrUn_... Banana cytosol 47.75 55.73
EER90481 Sorghum cytosol 55.97 55.67
CDY64867 Canola cytosol 54.64 55.08
CDY13228 Canola cytosol 10.61 54.05
Os03t0856700-02 Rice cytosol, mitochondrion 53.32 54.03
CDY64866 Canola cytosol, nucleus, peroxisome 42.97 52.26
TraesCS3A01G399800.1 Wheat cytosol 49.6 52.23
TraesCS3D01G394000.1 Wheat cytosol, peroxisome, plastid 49.6 52.09
Zm00001d034898_P001 Maize plastid 55.7 51.98
HORVU3Hr1G089980.2 Barley cytosol 49.07 51.82
TraesCS3D01G393900.1 Wheat cytosol 48.54 51.4
TraesCS3B01G432800.1 Wheat cytosol 49.07 51.39
Os07t0169700-01 Rice plasma membrane 49.87 51.23
CDY12880 Canola cytosol, nucleus, vacuole 56.76 50.59
CDY44829 Canola cytosol 52.25 50.38
CDY60083 Canola vacuole 53.58 50.25
EER95912 Sorghum cytosol 48.81 48.17
CDY13227 Canola cytosol 21.75 47.95
Zm00001d007894_P001 Maize cytosol 48.54 46.45
CDY71240 Canola cytosol, peroxisome, plastid 30.5 43.07
CDY70184 Canola cytosol 32.1 37.12
CDY69351 Canola cytosol, peroxisome 19.1 31.86
CDX82317 Canola cytosol 29.18 31.16
CDX82318 Canola cytosol 29.18 31.16
CDY22995 Canola cytosol 29.18 31.16
CDY22994 Canola cytosol 29.18 31.16
CDY36334 Canola cytosol 10.08 31.15
CDX92296 Canola cytosol, nucleus, peroxisome 28.12 30.37
CDX99287 Canola cytoskeleton, cytosol, peroxisome 27.85 30.17
CDX92294 Canola cytosol 26.79 28.69
CDX99288 Canola cytosol 26.79 28.69
Protein Annotations
MapMan:11.6.1.5Gene3D:2.60.120.330GO:A0A078GP71UniProt:A0A078GP71EnsemblPlants:CDY27101ProteinID:CDY27101
ProteinID:CDY27101.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00036929001InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PRINTS:PR00682
PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF140SUPFAM:SSF51197UniParc:UPI0004EDE84A:
Description
BnaA02g11210DBnaA02g11210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GP71]
Coordinates
chrLK032199:+:533619..535031
Molecular Weight (calculated)
42823.7 Da
IEP (calculated)
6.052
GRAVY (calculated)
-0.373
Length
377 amino acids
Sequence
(BLAST)
001: MAIICTTASP AEKEQEPKQS FENDQTPPIV FNPSLLNLQS QIPNQFIWPD EEKPSIDIPV LNVPFIDLSS QDSTLEASRL IAEACTKHGF FLVVNHGVSE
101: SLISDAHRLM GSFFDMPLAG KQRAQRKLGE SSGYASSFTG RFSTKLPWKE TLSFRFSNEN NGSRTVQDYF SCTLGQEFEQ FGNVYQEYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW RSIPPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KRDKVVKPPS EILDKTPRRY PDFTWPMFLE FTQKHYRADE NTLDSFSNWV ITNKNLI
Best Arabidopsis Sequence Match ( AT5G51810.1 )
(BLAST)
001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI
Arabidopsis Description
GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.