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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039251.1-P Field mustard cytosol 98.93 98.93
CDY64866 Canola cytosol, nucleus, peroxisome 77.54 93.55
CDY60083 Canola vacuole 96.79 90.05
AT1G60980.1 Thale cress cytosol, mitochondrion, peroxisome 74.33 73.94
CDY12880 Canola cytosol, nucleus, vacuole 76.74 67.85
CDY14054 Canola cytosol, nucleus, peroxisome 68.72 67.81
CDX70015 Canola cytosol, nucleus, peroxisome 68.45 67.55
CDX81038 Canola cytosol, nucleus, peroxisome 68.18 67.46
CDX98998 Canola cytosol, nucleus, peroxisome 67.91 67.02
CDY58871 Canola cytosol, endoplasmic reticulum, peroxisome 67.65 66.93
CDY44829 Canola cytosol 69.52 66.5
CDY05017 Canola cytosol, nucleus, peroxisome 67.38 66.49
CDY72226 Canola mitochondrion 41.44 59.85
CDY00263 Canola cytosol, nucleus, peroxisome 43.85 58.78
CDY49714 Canola cytosol, nucleus, peroxisome 54.55 58.29
GSMUA_Achr8P19120_001 Banana cytosol, extracellular, peroxisome 45.19 54.87
CDY52529 Canola cytosol, nucleus, peroxisome 55.88 54.86
CDY27101 Canola cytosol, nucleus, peroxisome 55.08 54.64
CDY55723 Canola cytosol, nucleus, peroxisome 54.81 54.52
PGSC0003DMT400000036 Potato cytosol 53.21 54.52
CDX91609 Canola cytosol, nucleus, peroxisome 55.08 54.5
Solyc01g093980.2.1 Tomato cytosol 52.94 54.4
CDX99892 Canola cytosol, nucleus, peroxisome 54.81 54.09
CDX94446 Canola cytosol, nucleus, peroxisome 54.28 53.99
CDX99893 Canola cytosol, nucleus, peroxisome 54.81 53.95
CDY00499 Canola cytosol, nucleus, peroxisome 54.55 53.68
CDX92707 Canola cytosol, nucleus, peroxisome 54.81 53.52
VIT_15s0048g01320.t01 Wine grape cytosol 54.55 53.12
GSMUA_Achr2P01010_001 Banana cytosol, peroxisome, plastid 43.05 51.44
HORVU5Hr1G124120.1 Barley cytosol 48.93 50.83
TraesCS5D01G566200.1 Wheat cytosol, peroxisome, plastid 48.93 50.69
KRH65199 Soybean cytosol 51.07 50.0
TraesCS5B01G560300.1 Wheat cytosol, peroxisome, plastid 48.93 49.86
TraesCS4A01G319100.1 Wheat cytosol, peroxisome, plastid 48.66 49.86
GSMUA_AchrUn_... Banana cytosol 42.25 48.92
CDY13228 Canola cytosol 9.63 48.65
EER90481 Sorghum cytosol 49.2 48.55
KRH48309 Soybean cytosol 51.34 48.48
Os03t0856700-02 Rice cytosol, mitochondrion 47.06 47.31
CDY13227 Canola cytosol 21.12 46.2
TraesCS3D01G393900.1 Wheat cytosol 43.05 45.22
Zm00001d034898_P001 Maize plastid 48.66 45.05
TraesCS3A01G399800.1 Wheat cytosol 42.78 44.69
TraesCS3D01G394000.1 Wheat cytosol, peroxisome, plastid 41.98 43.73
TraesCS3B01G432800.1 Wheat cytosol 41.98 43.61
Os07t0169700-01 Rice plasma membrane 42.78 43.6
HORVU3Hr1G089980.2 Barley cytosol 41.44 43.42
CDY71240 Canola cytosol, peroxisome, plastid 30.48 42.7
EER95912 Sorghum cytosol 41.44 40.58
Zm00001d007894_P001 Maize cytosol 41.18 39.09
CDY70184 Canola cytosol 32.35 37.12
CDY69351 Canola cytosol, peroxisome 18.98 31.42
CDY36334 Canola cytosol 10.16 31.15
CDX99287 Canola cytoskeleton, cytosol, peroxisome 27.54 29.6
CDX92296 Canola cytosol, nucleus, peroxisome 27.54 29.51
CDY22995 Canola cytosol 27.01 28.61
CDY22994 Canola cytosol 27.01 28.61
CDX82318 Canola cytosol 27.01 28.61
CDX82317 Canola cytosol 27.01 28.61
CDX99288 Canola cytosol 25.67 27.27
CDX92294 Canola cytosol 25.67 27.27
Protein Annotations
MapMan:11.6.1.5Gene3D:2.60.120.330GO:A0A078JHI2UniProt:A0A078JHI2EnsemblPlants:CDY64867ProteinID:CDY64867
ProteinID:CDY64867.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00043759001InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PRINTS:PR00682
PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF140SUPFAM:SSF51197UniParc:UPI0004EECF5A:
Description
BnaAnng19660DBnaAnng19660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHI2]
Coordinates
chrLK034581:+:4876..6368
Molecular Weight (calculated)
43067.3 Da
IEP (calculated)
6.678
GRAVY (calculated)
-0.467
Length
374 amino acids
Sequence
(BLAST)
001: MEYITELSFN GKKTEDNPLT LFGSTVINNQ QNQIPQEFVW PDDKKPSANI PILQIPLIDL AGILSGDQFL VSEATRLVAE GAKQHGFFLV TNHGVDEGLM
101: SSACTLMDRF FKSPTCEKQK AQRNHDESWG YTSSFVGKFK KNLPWKEMLS FRFSPQEKSE NHSEIVKDFI IKKMGQGYND FGSVYQEYAE AMSNLSLRIM
201: ELLAMSLGIK RSHFVEFFED NESILRLNYY PKCKQPNDVL GSGPHCDPTS LTILQQDHSG LQVFVDNQWQ SIPYNPQALV VNIGDTFRAL TNGRYKSCLH
301: QAVVNSQTER KTLVFFLSPK MDKVVKPPEE LEGERAYPDF TWSLLHEFVM KHYRTDENTL KEFTKWLKTR RIFL
Best Arabidopsis Sequence Match ( AT1G60980.1 )
(BLAST)
001: MECIIKLPQR FNKNKSKKNP LRIFDSTVLN HQPDHIPQEF VWPDHEKPSK NVPILQVPVI DLAGFLSNDP LLVSEAERLV SEAAKKHGFF LVTNHGVDER
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF
Arabidopsis Description
GA20OX4Gibberellin 20 oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C955]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.