Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g093980.2.1 | Tomato | cytosol | 95.62 | 95.88 |
| VIT_15s0048g01320.t01 | Wine grape | cytosol | 69.04 | 65.62 |
| PGSC0003DMT400086432 | Potato | cytosol | 27.95 | 65.38 |
| CDY72226 | Canola | mitochondrion | 45.75 | 64.48 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 61.37 | 64.0 |
| Bra019165.1-P | Field mustard | cytosol | 61.1 | 63.71 |
| PGSC0003DMT400062314 | Potato | cytosol | 65.21 | 62.96 |
| PGSC0003DMT400036523 | Potato | cytosol | 53.42 | 62.7 |
| PGSC0003DMT400042644 | Potato | cytosol | 57.26 | 62.2 |
| PGSC0003DMT400071866 | Potato | cytosol | 63.29 | 61.6 |
| PGSC0003DMT400090397 | Potato | cytosol | 62.47 | 61.13 |
| PGSC0003DMT400091205 | Potato | cytosol, nucleus, peroxisome | 26.3 | 60.76 |
| PGSC0003DMT400092587 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 26.58 | 60.25 |
| KRH65199 | Soybean | cytosol | 62.74 | 59.95 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 61.1 | 59.31 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 49.86 | 59.09 |
| Bra013890.1-P | Field mustard | cytosol | 60.82 | 59.04 |
| AT1G60980.1 | Thale cress | cytosol, mitochondrion, peroxisome | 60.82 | 59.04 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 60.82 | 59.04 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 60.82 | 58.89 |
| AT4G25420.1 | Thale cress | cytosol, nucleus, peroxisome | 60.82 | 58.89 |
| Bra022565.1-P | Field mustard | cytosol | 60.55 | 58.62 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 60.55 | 58.47 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 61.1 | 58.22 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 57.53 | 58.17 |
| AT5G51810.1 | Thale cress | cytosol, nucleus, peroxisome | 60.0 | 57.94 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 56.99 | 57.78 |
| AT5G07200.1 | Thale cress | cytosol, nucleus, peroxisome | 59.73 | 57.37 |
| KRH48309 | Soybean | cytosol | 62.19 | 57.32 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 59.45 | 57.26 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 59.45 | 57.11 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 59.18 | 56.99 |
| PGSC0003DMT400088638 | Potato | cytosol | 39.45 | 56.92 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 58.9 | 56.88 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 58.9 | 56.88 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 48.77 | 56.87 |
| Bra028277.1-P | Field mustard | cytosol, nucleus, peroxisome | 59.18 | 56.84 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 59.18 | 56.84 |
| Bra005927.1-P | Field mustard | cytosol | 50.68 | 56.75 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 58.9 | 56.73 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 58.9 | 56.73 |
| TraesCS5B01G560300.1 | Wheat | cytosol, peroxisome, plastid | 56.99 | 56.68 |
| Bra028706.1-P | Field mustard | cytosol | 58.63 | 56.46 |
| Bra009285.1-P | Field mustard | cytosol | 58.63 | 56.46 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 58.63 | 56.46 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 56.44 | 56.44 |
| PGSC0003DMT400090198 | Potato | mitochondrion | 13.7 | 55.56 |
| EER90481 | Sorghum | cytosol | 57.53 | 55.41 |
| Bra027106.1-P | Field mustard | cytosol | 56.71 | 55.05 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 41.64 | 54.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.67 | 53.87 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 54.79 | 53.76 |
| Bra039251.1-P | Field mustard | cytosol | 54.52 | 53.21 |
| CDY64867 | Canola | cytosol | 54.52 | 53.21 |
| PGSC0003DMT400088528 | Potato | cytosol, peroxisome, plastid | 18.36 | 51.94 |
| Zm00001d034898_P001 | Maize | plastid | 57.26 | 51.73 |
| Bra031467.1-P | Field mustard | cytosol | 53.42 | 51.72 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 50.14 | 51.26 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 49.86 | 51.12 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 43.01 | 50.65 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 52.6 | 50.39 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 49.32 | 50.28 |
| PGSC0003DMT400091526 | Potato | cytosol | 32.88 | 50.21 |
| Bra010064.1-P | Field mustard | cytosol | 51.78 | 50.13 |
| Os07t0169700-01 | Rice | plasma membrane | 49.59 | 49.32 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 48.49 | 49.3 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 48.49 | 49.17 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 56.71 | 48.94 |
| CDY60083 | Canola | vacuole | 53.7 | 48.76 |
| CDY44829 | Canola | cytosol | 51.51 | 48.08 |
| PGSC0003DMT400097234 | Potato | cytosol, mitochondrion, plastid | 16.44 | 47.62 |
| EER95912 | Sorghum | cytosol | 47.95 | 45.81 |
| Zm00001d007894_P001 | Maize | cytosol | 48.22 | 44.67 |
| PGSC0003DMT400089703 | Potato | nucleus | 18.08 | 44.0 |
| PGSC0003DMT400086504 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 13.42 | 43.36 |
| PGSC0003DMT400090419 | Potato | cytosol | 18.9 | 35.75 |
| PGSC0003DMT400066714 | Potato | cytosol | 27.67 | 28.77 |
| PGSC0003DMT400066716 | Potato | cytosol | 27.67 | 28.53 |
| PGSC0003DMT400066712 | Potato | cytosol | 10.14 | 23.42 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | UniProt:M0ZG05 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| EnsemblPlantsGene:PGSC0003DMG400000011 | PGSC:PGSC0003DMG400000011 | EnsemblPlants:PGSC0003DMT400000036 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF358 | SUPFAM:SSF51197 | UniParc:UPI000296A0B0 | SEG:seg | : | : |
Description
Gibberellin 20-oxidase 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400000011]
Coordinates
chr1:+:71463509..71465702
Molecular Weight (calculated)
42207.3 Da
IEP (calculated)
6.872
GRAVY (calculated)
-0.419
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MHDETQVDEE TSLVFDFLKN NANIPQQFIW PDDEKPCPQP PPLLYVPPID LNGYLSGDPL AVSNATRLVN EACRKHGFFL VVNHGIDMKL INEAHKNMDF
101: FFGKPLVEKE KAKRKVGDYC GYASSFTNRF SRNLPWKETL SFRYSAEFPY SHHIVQNYIL NVMGQEYTHF GDVYQKYCEE MSKLSLSVAE LLGESIGVGR
201: SYFREFFEEN DSIMRLNYYP TCQKPDLTLG TGPHCDPTSL TILHQDDVGG LEVFVDEKWH SIPTNTNAFV VNIGDTFMVM SNGTYKSCLH RAIVNCRRTR
301: KSLAFFLCPK QDKIVSPPKE LITKNLPRKF PDFTWPLFLE FTQKHYRADR NTLDAFVHWL LHKTS
101: FFGKPLVEKE KAKRKVGDYC GYASSFTNRF SRNLPWKETL SFRYSAEFPY SHHIVQNYIL NVMGQEYTHF GDVYQKYCEE MSKLSLSVAE LLGESIGVGR
201: SYFREFFEEN DSIMRLNYYP TCQKPDLTLG TGPHCDPTSL TILHQDDVGG LEVFVDEKWH SIPTNTNAFV VNIGDTFMVM SNGTYKSCLH RAIVNCRRTR
301: KSLAFFLCPK QDKIVSPPKE LITKNLPRKF PDFTWPLFLE FTQKHYRADR NTLDAFVHWL LHKTS
001: MATECIATVP QIFSENKTKE DSSIFDAKLL NQHSHHIPQQ FVWPDHEKPS TDVQPLQVPL IDLAGFLSGD SCLASEATRL VSKAATKHGF FLITNHGVDE
101: SLLSRAYLHM DSFFKAPACE KQKAQRKWGE SSGYASSFVG RFSSKLPWKE TLSFKFSPEE KIHSQTVKDF VSKKMGDGYE DFGKVYQEYA EAMNTLSLKI
201: MELLGMSLGV ERRYFKEFFE DSDSIFRLNY YPQCKQPELA LGTGPHCDPT SLTILHQDQV GGLQVFVDNK WQSIPPNPHA FVVNIGDTFM ALTNGRYKSC
301: LHRAVVNSER ERKTFAFFLC PKGEKVVKPP EELVNGVKSG ERKYPDFTWS MFLEFTQKHY RADMNTLDEF SIWLKNRRSF
101: SLLSRAYLHM DSFFKAPACE KQKAQRKWGE SSGYASSFVG RFSSKLPWKE TLSFKFSPEE KIHSQTVKDF VSKKMGDGYE DFGKVYQEYA EAMNTLSLKI
201: MELLGMSLGV ERRYFKEFFE DSDSIFRLNY YPQCKQPELA LGTGPHCDPT SLTILHQDQV GGLQVFVDNK WQSIPPNPHA FVVNIGDTFM ALTNGRYKSC
301: LHRAVVNSER ERKTFAFFLC PKGEKVVKPP EELVNGVKSG ERKYPDFTWS MFLEFTQKHY RADMNTLDEF SIWLKNRRSF
Arabidopsis Description
GA20OX3Gibberellin 20 oxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q39112]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.