Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400066714 | Potato | cytosol | 100.0 | 45.01 |
| Solyc01g108860.2.1 | Tomato | cytosol | 90.51 | 40.74 |
| VIT_03s0063g01280.t01 | Wine grape | cytosol | 60.13 | 38.46 |
| VIT_03s0063g01330.t01 | Wine grape | cytosol | 60.13 | 30.45 |
| VIT_03s0063g01150.t01 | Wine grape | cytosol | 60.13 | 27.78 |
| VIT_03s0063g01260.t01 | Wine grape | cytosol | 60.13 | 27.78 |
| VIT_03s0063g01210.t01 | Wine grape | cytosol | 59.49 | 27.49 |
| VIT_03s0063g01290.t01 | Wine grape | cytosol | 58.86 | 27.19 |
| PGSC0003DMT400066716 | Potato | cytosol | 55.06 | 24.58 |
| VIT_03s0063g01180.t01 | Wine grape | cytosol | 60.13 | 24.17 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 37.97 | 22.47 |
| OQU91363 | Sorghum | cytosol | 44.94 | 19.94 |
| GSMUA_Achr7P08240_001 | Banana | cytosol | 37.34 | 18.79 |
| Os03t0618300-01 | Rice | cytosol | 41.77 | 18.75 |
| GSMUA_Achr7P08230_001 | Banana | cytosol | 37.34 | 18.27 |
| KXG38014 | Sorghum | cytosol | 39.87 | 18.26 |
| TraesCS4B01G081200.1 | Wheat | cytosol | 39.87 | 18.1 |
| EER91221 | Sorghum | cytosol | 39.24 | 18.08 |
| Zm00001d013725_P002 | Maize | cytosol | 42.41 | 18.06 |
| VIT_03s0063g01160.t01 | Wine grape | cytosol | 30.38 | 17.71 |
| TraesCS4A01G234100.1 | Wheat | cytosol | 38.61 | 17.53 |
| TraesCS4D01G079900.1 | Wheat | cytosol | 38.61 | 17.53 |
| HORVU4Hr1G013840.1 | Barley | cytosol | 41.14 | 16.88 |
| VIT_03s0063g01310.t01 | Wine grape | cytosol | 60.76 | 16.27 |
| Zm00001d033327_P001 | Maize | cytosol | 29.11 | 14.94 |
| PGSC0003DMT400088638 | Potato | cytosol | 22.15 | 13.83 |
| PGSC0003DMT400091205 | Potato | cytosol, nucleus, peroxisome | 11.39 | 11.39 |
| PGSC0003DMT400036523 | Potato | cytosol | 21.52 | 10.93 |
| PGSC0003DMT400000036 | Potato | cytosol | 23.42 | 10.14 |
| PGSC0003DMT400062314 | Potato | cytosol | 23.42 | 9.79 |
| PGSC0003DMT400090397 | Potato | cytosol | 22.15 | 9.38 |
| PGSC0003DMT400071866 | Potato | cytosol | 22.15 | 9.33 |
| PGSC0003DMT400091526 | Potato | cytosol | 12.66 | 8.37 |
| PGSC0003DMT400042644 | Potato | cytosol | 17.72 | 8.33 |
| PGSC0003DMT400089703 | Potato | nucleus | 7.59 | 8.0 |
| PGSC0003DMT400088528 | Potato | cytosol, peroxisome, plastid | 4.43 | 5.43 |
| PGSC0003DMT400097234 | Potato | cytosol, mitochondrion, plastid | 1.9 | 2.38 |
| VIT_03s0063g01250.t01 | Wine grape | cytosol | 1.9 | 1.59 |
| PGSC0003DMT400086504 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| PGSC0003DMT400086432 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400092587 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 0.0 | 0.0 |
| PGSC0003DMT400090198 | Potato | mitochondrion | 0.0 | 0.0 |
| PGSC0003DMT400090419 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400066712 | EnsemblPlantsGene:PGSC0003DMG401025923 | Gene3D:2.60.120.330 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR027443 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF98 | PFAM:PF14226 | PGSC:PGSC0003DMG401025923 | SUPFAM:SSF51197 | UniParc:UPI000295B986 |
| UniProt:M1CG15 | MapMan:35.2 | : | : | : | : |
Description
2-oxoglutarate-dependent dioxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG401025923]
Coordinates
chr1:-:85227635..85228111
Molecular Weight (calculated)
18422.2 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.509
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIVHPAIIQ DVEHRPKLTK TEAEGIPVID LSILNCPYTS TTDAELESLV AEIRNACKKW GFFQVINHGV SLECREKIEL ASRKFFGLPK EEKIKVKRNE
101: VNFMGYYDTE LTKKIRDWKE VFDFTVEKTA MVPLSQDPND KELREFHNQW PQYPPGLR
101: VNFMGYYDTE LTKKIRDWKE VFDFTVEKTA MVPLSQDPND KELREFHNQW PQYPPGLR
001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVN VDFRLKTN
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVN VDFRLKTN
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.