Factsheet for VIT_03s0063g01310.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g01330.t01	Wine grape	cytosol	48.64	91.99
VIT_03s0063g01260.t01	Wine grape	cytosol	51.69	89.18
VIT_03s0063g01280.t01	Wine grape	cytosol	37.29	89.07
VIT_03s0063g01290.t01	Wine grape	cytosol	51.36	88.6
VIT_03s0063g01150.t01	Wine grape	cytosol	51.19	88.3
VIT_03s0063g01210.t01	Wine grape	cytosol	49.49	85.38
VIT_03s0063g01160.t01	Wine grape	cytosol	37.46	81.55
VIT_03s0063g01180.t01	Wine grape	cytosol	52.03	78.12
VIT_03s0063g01250.t01	Wine grape	cytosol	24.07	75.13
VIT_03s0063g01220.t01	Wine grape	cytosol	11.69	72.63
VIT_03s0063g01340.t01	Wine grape	cytosol	36.61	62.25
PGSC0003DMT400066712	Potato	cytosol	16.27	60.76
Solyc01g108860.2.1	Tomato	cytosol	35.76	60.11
PGSC0003DMT400066714	Potato	cytosol	35.59	59.83
GSMUA_Achr7P08230_001	Banana	cytosol	32.71	59.75
GSMUA_Achr7P08240_001	Banana	cytosol	31.69	59.55
TraesCS4D01G079900.1	Wheat	cytosol	31.02	52.59
TraesCS4A01G234100.1	Wheat	cytosol	31.02	52.59
TraesCS4B01G081200.1	Wheat	cytosol	30.85	52.3
Os03t0618300-01	Rice	cytosol	31.02	51.99
Zm00001d033327_P001	Maize	cytosol	26.78	51.3
OQU91363	Sorghum	cytosol	30.34	50.28
KXG38014	Sorghum	cytosol	29.32	50.14
EER91221	Sorghum	cytosol	28.98	49.85
HORVU4Hr1G013840.1	Barley	cytosol	31.02	47.53
Zm00001d013725_P002	Maize	cytosol	26.78	42.59
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	18.98	41.95
VIT_02s0234g00010.t01	Wine grape	cytosol	16.95	28.01
VIT_04s0044g01650.t01	Wine grape	cytosol	17.8	27.85
VIT_16s0022g02310.t01	Wine grape	cytosol	17.46	26.96
VIT_18s0001g01390.t01	Wine grape	cytosol	17.12	26.72
VIT_04s0044g01520.t01	Wine grape	cytosol	16.78	26.4
VIT_15s0048g01320.t01	Wine grape	cytosol	16.1	24.74

Protein Annotations

EntrezGene:100241930	wikigene:100241930	EntrezGene:100247063	wikigene:100247063	Gene3D:2.60.120.330	Gene3D:3.40.50.1820
MapMan:50.1.13	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	ProteinID:CCB56911	ProteinID:CCB56911.1	InterPro:DIOX_N
UniProt:F6HQF4	EMBL:FN596006	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016787	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:IPR029058	EntrezGene:LOC100241930	wikigene:LOC100241930	EntrezGene:LOC100247063	wikigene:LOC100247063	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF12697	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF98	SUPFAM:SSF51197	SUPFAM:SSF53474	UniParc:UPI0002108B54	ArrayExpress:VIT_03s0063g01310	EnsemblPlantsGene:VIT_03s0063g01310
EnsemblPlants:VIT_03s0063g01310.t01	RefSeq:XP_002284907	RefSeq:XP_002284907.2	RefSeq:XP_002284910	RefSeq:XP_002284910.1	SEG:seg

Description

No Description!

Coordinates

chr3:-:4768405..4771917

Molecular Weight (calculated)

66860.1 Da

IEP (calculated)

6.768

GRAVY (calculated)

-0.334

Length

590 amino acids

Sequence
(BLAST)

001: MGEVDPAFIQ DTQHRPELAV IEAEGIPLID LSSANASNHV SQIADACKNW GFFQVINHGV PSESRRKIED AARKFFALPL EEKRKVSRDE VNPLGYFDTE
101: HTKNVRDWKE VFDFVVPTPA FIPASPDPDD KELKELTNQW PQYPPELREV CEEYAREMGK LAFKLLGLIS LSLGLPENRF NILFEESTNF IRLNHYPPCP
201: IPHLALGVGR HKDSRALTIL AQDDVGGLEV KRKTNGEWVR VKPTPDAFII NVGDIIQVWS NDTYESVEHR VTVNSERERF SIPVFFSPGH HVWVKPLEEL
301: TKGEKPKYRA YNWGKFFAAR RRMYPMASEG RQANPVKHFV LVHGSCHGAW SWYKIVALLK SSGHKVTALD LAASGINPKQ VGDLRSISWY FQPLRDFVES
401: LPADERVVLV GHSLGGLAIS QAMEKFPEKV SVAVFVTASM PGPTLNISTL NQESLRRQGP LLDSQFTYDN GPNNPPTTFS FGPLFLSLNV YQLSPTEDLA
501: LGTVLMRPVR LFIEEDMSNE LMLSKKYASV KRVFIISEED KLGKRDFQLW MIEKNPPDAV KEIKGSDHMV MISKPKELWV HLQAIAEKYS

Best Arabidopsis Sequence Match ( AT3G19000.1 )
(BLAST)

001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.