Factsheet for VIT_03s0063g01160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g01250.t01	Wine grape	cytosol	50.92	73.02
VIT_03s0063g01210.t01	Wine grape	cytosol	91.51	72.51
VIT_03s0063g01220.t01	Wine grape	cytosol	24.72	70.53
VIT_03s0063g01280.t01	Wine grape	cytosol	61.99	68.02
VIT_03s0063g01150.t01	Wine grape	cytosol	84.5	66.96
VIT_03s0063g01260.t01	Wine grape	cytosol	83.76	66.37
VIT_03s0063g01290.t01	Wine grape	cytosol	81.55	64.62
VIT_03s0063g01330.t01	Wine grape	cytosol	73.8	64.1
VIT_03s0063g01180.t01	Wine grape	cytosol	83.39	57.51
GSMUA_Achr7P08240_001	Banana	cytosol	60.89	52.55
VIT_03s0063g01340.t01	Wine grape	cytosol	67.16	52.45
GSMUA_Achr7P08230_001	Banana	cytosol	62.36	52.32
PGSC0003DMT400066714	Potato	cytosol	61.62	47.58
Solyc01g108860.2.1	Tomato	cytosol	60.52	46.72
Zm00001d033327_P001	Maize	cytosol	52.77	46.43
TraesCS4D01G079900.1	Wheat	cytosol	57.2	44.54
TraesCS4A01G234100.1	Wheat	cytosol	57.2	44.54
Os03t0618300-01	Rice	cytosol	56.83	43.75
TraesCS4B01G081200.1	Wheat	cytosol	56.09	43.68
EER91221	Sorghum	cytosol	53.51	42.27
OQU91363	Sorghum	cytosol	55.35	42.13
KXG38014	Sorghum	cytosol	52.03	40.87
HORVU4Hr1G013840.1	Barley	cytosol	57.56	40.52
VIT_03s0063g01310.t01	Wine grape	cytosol	81.55	37.46
Zm00001d013725_P002	Maize	cytosol	45.76	33.42
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	31.0	31.46
PGSC0003DMT400066712	Potato	cytosol	17.71	30.38
VIT_18s0001g01390.t01	Wine grape	cytosol	31.0	22.22
VIT_02s0234g00010.t01	Wine grape	cytosol	28.78	21.85
VIT_04s0044g01650.t01	Wine grape	cytosol	30.26	21.75
VIT_16s0022g02310.t01	Wine grape	cytosol	30.26	21.47
VIT_04s0044g01520.t01	Wine grape	cytosol	29.15	21.07
VIT_15s0048g01320.t01	Wine grape	cytosol	29.15	20.57

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:CBI32474	ProteinID:CBI32474.3	UniProt:D7TPQ1	InterPro:DIOX_N
EMBL:FN596006	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF98
SUPFAM:SSF51197	UniParc:UPI0001BE3BB6	ArrayExpress:VIT_03s0063g01160	EnsemblPlantsGene:VIT_03s0063g01160	EnsemblPlants:VIT_03s0063g01160.t01	:

Description

No Description!

Coordinates

chr3:-:4651703..4652971

Molecular Weight (calculated)

31380.2 Da

IEP (calculated)

6.060

GRAVY (calculated)

-0.568

Length

271 amino acids

Sequence
(BLAST)

001: MQELGLFSME EKRKVSRDEV NPFGYFDTEH TKNVRDWKEV FDFVVRTPAF GPASDDPDDK ELIELTNRWP QYPPELREVC EEYARETEKL AFKLMGLISL
101: SLGLPENRFN LFFEESTSSV RFNHYPPCPV PHLALGVGHH KDVGALTILA QDDVGGLEVK RKTDGEWVRV KPTPDAYIIN VGDIIQAWSN DTYESVEHRV
201: ILNSERERFS IPFFFNPAHH LWVQPLEELT KGEKPKYRAY NLGKFLATKK RSNLKKLGVE NLQISHFKVS E

Best Arabidopsis Sequence Match ( AT3G19000.1 )
(BLAST)

001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.