Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086432 | Potato | cytosol | 31.41 | 76.92 |
| KRH38652 | Soybean | cytosol | 74.61 | 74.61 |
| KRG91415 | Soybean | cytosol | 73.56 | 73.37 |
| KRH09174 | Soybean | cytosol | 58.12 | 73.03 |
| KRH35405 | Soybean | cytosol | 69.37 | 72.6 |
| PGSC0003DMT400071866 | Potato | cytosol | 70.94 | 72.27 |
| PGSC0003DMT400062314 | Potato | cytosol | 71.2 | 71.96 |
| Solyc03g006880.2.1 | Tomato | cytosol | 70.94 | 71.69 |
| Solyc06g035530.2.1 | Tomato | cytosol | 69.63 | 71.51 |
| PGSC0003DMT400036523 | Potato | cytosol | 58.12 | 71.38 |
| VIT_15s0048g01320.t01 | Wine grape | cytosol | 71.73 | 71.35 |
| PGSC0003DMT400042644 | Potato | cytosol | 61.52 | 69.94 |
| PGSC0003DMT400092587 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 29.06 | 68.94 |
| PGSC0003DMT400090397 | Potato | cytosol | 67.28 | 68.9 |
| Solyc11g072310.1.1 | Tomato | cytosol | 67.8 | 68.34 |
| Solyc09g009110.2.1 | Tomato | cytosol | 67.28 | 67.99 |
| PGSC0003DMT400090198 | Potato | mitochondrion | 15.97 | 67.78 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 54.45 | 67.53 |
| PGSC0003DMT400091205 | Potato | cytosol, nucleus, peroxisome | 27.75 | 67.09 |
| TraesCS5D01G566200.1 | Wheat | cytosol, peroxisome, plastid | 63.35 | 67.04 |
| HORVU5Hr1G124120.1 | Barley | cytosol | 62.3 | 66.11 |
| TraesCS4A01G319100.1 | Wheat | cytosol, peroxisome, plastid | 63.09 | 66.03 |
| Solyc06g050110.1.1 | Tomato | cytosol | 62.57 | 65.84 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 53.93 | 65.81 |
| TraesCS5B01G560300.1 | Wheat | cytosol, peroxisome, plastid | 63.09 | 65.67 |
| PGSC0003DMT400088638 | Potato | cytosol | 41.62 | 62.85 |
| EER90481 | Sorghum | cytosol | 60.73 | 61.21 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.79 | 60.06 |
| Solyc10g045690.1.1 | Tomato | cytosol, nucleus, peroxisome | 29.58 | 59.47 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 57.85 | 59.41 |
| PGSC0003DMT400088528 | Potato | cytosol, peroxisome, plastid | 19.9 | 58.91 |
| Zm00001d034898_P001 | Maize | plastid | 60.73 | 57.43 |
| PGSC0003DMT400091526 | Potato | cytosol | 35.86 | 57.32 |
| TraesCS3D01G393900.1 | Wheat | cytosol | 51.31 | 55.06 |
| HORVU3Hr1G089980.2 | Barley | cytosol | 51.05 | 54.62 |
| TraesCS3A01G399800.1 | Wheat | cytosol | 51.05 | 54.47 |
| TraesCS3B01G432800.1 | Wheat | cytosol | 51.31 | 54.44 |
| TraesCS3D01G394000.1 | Wheat | cytosol, peroxisome, plastid | 51.05 | 54.32 |
| CDY13228 | Canola | cytosol | 10.47 | 54.05 |
| PGSC0003DMT400097234 | Potato | cytosol, mitochondrion, plastid | 17.8 | 53.97 |
| VIT_18s0001g01390.t01 | Wine grape | cytosol | 53.4 | 53.97 |
| VIT_04s0044g01650.t01 | Wine grape | cytosol | 51.31 | 51.99 |
| Os07t0169700-01 | Rice | plasma membrane | 48.95 | 50.95 |
| PGSC0003DMT400089703 | Potato | nucleus | 19.9 | 50.67 |
| Solyc10g045770.1.1 | Tomato | cytosol | 14.14 | 49.54 |
| EER95912 | Sorghum | cytosol | 48.95 | 48.95 |
| Zm00001d007894_P001 | Maize | cytosol | 50.26 | 48.73 |
| PGSC0003DMT400086504 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 14.4 | 48.67 |
| Solyc10g046820.1.1 | Tomato | cytosol, nucleus, peroxisome | 24.08 | 46.7 |
| VIT_04s0044g01520.t01 | Wine grape | cytosol | 44.24 | 45.07 |
| CDY13227 | Canola | cytosol | 19.9 | 44.44 |
| VIT_03s0063g01220.t01 | Wine grape | cytosol | 8.64 | 34.74 |
| VIT_03s0063g01250.t01 | Wine grape | cytosol | 16.49 | 33.33 |
| VIT_03s0063g01280.t01 | Wine grape | cytosol | 20.16 | 31.17 |
| VIT_03s0063g01150.t01 | Wine grape | cytosol | 27.75 | 30.99 |
| VIT_03s0063g01330.t01 | Wine grape | cytosol | 25.13 | 30.77 |
| VIT_02s0234g00010.t01 | Wine grape | cytosol | 28.53 | 30.53 |
| VIT_03s0063g01160.t01 | Wine grape | cytosol | 21.47 | 30.26 |
| VIT_03s0063g01210.t01 | Wine grape | cytosol | 26.96 | 30.12 |
| VIT_03s0063g01260.t01 | Wine grape | cytosol | 26.44 | 29.53 |
| VIT_03s0063g01290.t01 | Wine grape | cytosol | 26.44 | 29.53 |
| VIT_03s0063g01340.t01 | Wine grape | cytosol | 26.7 | 29.39 |
| VIT_03s0063g01180.t01 | Wine grape | cytosol | 26.7 | 25.95 |
| VIT_03s0063g01310.t01 | Wine grape | cytosol | 26.96 | 17.46 |
Protein Annotations
| EntrezGene:100232996 | wikigene:100232996 | MapMan:11.6.1.5 | Gene3D:2.60.120.330 | UniProt:A5B9J3 | ProteinID:ABF61825 |
| ProteinID:ABF61825.1 | ProteinID:ABF61826 | ProteinID:ABF61826.1 | ProteinID:AFD54200 | ProteinID:AFD54200.1 | EMBL:AM451380 |
| ProteinID:CAN78788 | ProteinID:CAN78788.1 | ProteinID:CCB49236 | ProteinID:CCB49236.1 | InterPro:DIOX_N | EMBL:DQ508816 |
| EMBL:DQ508817 | EMBL:FN595506 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0006629 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009686 | GO:GO:0009719 |
| GO:GO:0009740 | GO:GO:0009791 | GO:GO:0009826 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0016491 | GO:GO:0040007 | GO:GO:0045544 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | EMBL:JQ086557 | EMBL:KC898189 | EntrezGene:LOC100232996 |
| wikigene:LOC100232996 | RefSeq:NP_001267911.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF140 | SUPFAM:SSF51197 | TIGR:TC53725 | UniParc:UPI00015241CA |
| ArrayExpress:VIT_16s0022g02310 | EnsemblPlantsGene:VIT_16s0022g02310 | EnsemblPlants:VIT_16s0022g02310.t01 | unigene:Vvi.4209 | : | : |
Description
GA20ox3 [Source:UniProtKB/TrEMBL;Acc:A5B9J3]
Coordinates
chr16:-:14861534..14863137
Molecular Weight (calculated)
43161.4 Da
IEP (calculated)
6.133
GRAVY (calculated)
-0.313
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIVCVEGNP PSMFNPPTDD HKNQEPLVFD ASVLRHQSNI PKQFIWPDAE KPGDKATELS VPLIDLGGFL SGDPAAAMEA TRLVREACQK HGFFLVVNHG
101: VDDKLIYKAH QYMDSFFGLP LAKKQRAQRK LGEHCGYASS FIGRFSSKLP WKETLSFSYS AEKKSSNAVQ EYFLNKMGED FSEFGQVYQD YCEAMSTLSL
201: VIMELLGMSL GIGGAHFREF FEENDSIMRL NYYPPCLKPD LTLGTGPHCD PTSLTILHQD QVGGLQVFVD DKWWSISPNF DAFVVNIGDT FMALSNGRYK
301: SCLHRAVVNS QTPRKSLAFF LCPEKDKVVR PPTELVDTNS PRIYPDFTWS NLLEFTQKHY RADMKTLEVF SSWLQQKTAE AV
101: VDDKLIYKAH QYMDSFFGLP LAKKQRAQRK LGEHCGYASS FIGRFSSKLP WKETLSFSYS AEKKSSNAVQ EYFLNKMGED FSEFGQVYQD YCEAMSTLSL
201: VIMELLGMSL GIGGAHFREF FEENDSIMRL NYYPPCLKPD LTLGTGPHCD PTSLTILHQD QVGGLQVFVD DKWWSISPNF DAFVVNIGDT FMALSNGRYK
301: SCLHRAVVNS QTPRKSLAFF LCPEKDKVVR PPTELVDTNS PRIYPDFTWS NLLEFTQKHY RADMKTLEVF SSWLQQKTAE AV
001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI
Arabidopsis Description
GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.