Factsheet for TraesCS3D01G394000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G393900.1	Wheat	cytosol	94.15	94.94
TraesCS3A01G399800.1	Wheat	cytosol	94.43	94.69
TraesCS3B01G432800.1	Wheat	cytosol	94.15	93.89
HORVU3Hr1G089980.2	Barley	cytosol	88.58	89.08
Os07t0169700-01	Rice	plasma membrane	74.93	73.3
EER95912	Sorghum	cytosol	71.03	66.75
Zm00001d007894_P001	Maize	cytosol	70.19	63.96
TraesCS5D01G566200.1	Wheat	cytosol, peroxisome, plastid	58.22	57.89
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	49.58	57.79
PGSC0003DMT400086432	Potato	cytosol	24.23	55.77
CDY72226	Canola	mitochondrion	40.11	55.6
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	48.19	55.27
GSMUA_AchrUn_...	Banana	cytosol	47.35	52.63
CDY49714	Canola	cytosol, nucleus, peroxisome	50.7	52.0
Bra019165.1-P	Field mustard	cytosol	50.42	51.71
VIT_16s0022g02310.t01	Wine grape	cytosol	54.32	51.05
KRG91415	Soybean	cytosol	53.76	50.39
PGSC0003DMT400062314	Potato	cytosol	52.65	50.0
Bra022565.1-P	Field mustard	cytosol	52.37	49.87
PGSC0003DMT400036523	Potato	cytosol	43.18	49.84
CDY27101	Canola	cytosol, nucleus, peroxisome	52.09	49.6
KRH38652	Soybean	cytosol	52.65	49.48
CDX91609	Canola	cytosol, nucleus, peroxisome	52.09	49.47
CDY55723	Canola	cytosol, nucleus, peroxisome	51.81	49.47
PGSC0003DMT400091205	Potato	cytosol, nucleus, peroxisome	21.73	49.37
Solyc03g006880.2.1	Tomato	cytosol	51.81	49.21
CDX94446	Canola	cytosol, nucleus, peroxisome	51.53	49.2
Bra013890.1-P	Field mustard	cytosol	51.53	49.2
AT4G25420.1	Thale cress	cytosol, nucleus, peroxisome	51.53	49.07
Solyc01g093980.2.1	Tomato	cytosol	49.58	48.9
CDX99892	Canola	cytosol, nucleus, peroxisome	51.53	48.81
CDY00263	Canola	cytosol, nucleus, peroxisome	37.88	48.75
VIT_15s0048g01320.t01	Wine grape	cytosol	52.09	48.7
KRH65199	Soybean	cytosol	51.81	48.69
CDX99893	Canola	cytosol, nucleus, peroxisome	51.53	48.68
CDY13228	Canola	cytosol	10.03	48.65
PGSC0003DMT400000036	Potato	cytosol	49.3	48.49
PGSC0003DMT400092587	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	21.73	48.45
CDY00499	Canola	cytosol, nucleus, peroxisome	51.25	48.42
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	51.25	48.42
AT5G51810.1	Thale cress	cytosol, nucleus, peroxisome	50.97	48.41
Solyc11g072310.1.1	Tomato	cytosol	50.97	48.28
PGSC0003DMT400090397	Potato	cytosol	50.14	48.26
KRH35405	Soybean	cytosol	49.03	48.22
PGSC0003DMT400042644	Potato	cytosol	44.85	47.92
CDX98998	Canola	cytosol, nucleus, peroxisome	50.42	47.76
Bra009285.1-P	Field mustard	cytosol	50.14	47.49
CDX70015	Canola	cytosol, nucleus, peroxisome	50.14	47.49
KRH48309	Soybean	cytosol	52.37	47.47
AT5G07200.1	Thale cress	cytosol, nucleus, peroxisome	50.14	47.37
CDY58871	Canola	cytosol, endoplasmic reticulum, peroxisome	49.86	47.35
CDX92707	Canola	cytosol, nucleus, peroxisome	50.42	47.26
KRH09174	Soybean	cytosol	39.83	47.04
CDY14054	Canola	cytosol, nucleus, peroxisome	49.58	46.97
Solyc09g009110.2.1	Tomato	cytosol	49.3	46.83
CDX81038	Canola	cytosol, nucleus, peroxisome	49.3	46.83
PGSC0003DMT400071866	Potato	cytosol	48.75	46.67
Bra005927.1-P	Field mustard	cytosol	42.34	46.63
Solyc06g035530.2.1	Tomato	cytosol	48.19	46.51
CDY05017	Canola	cytosol, nucleus, peroxisome	49.03	46.44
Bra028706.1-P	Field mustard	cytosol	48.75	46.17
AT1G60980.1	Thale cress	cytosol, mitochondrion, peroxisome	48.19	46.01
PGSC0003DMT400088638	Potato	cytosol	32.03	45.45
Solyc06g050110.1.1	Tomato	cytosol	45.68	45.18
PGSC0003DMT400090198	Potato	mitochondrion	11.14	44.44
Bra027106.1-P	Field mustard	cytosol	46.52	44.41
CDY52529	Canola	cytosol, nucleus, peroxisome	47.08	44.36
Bra010064.1-P	Field mustard	cytosol	46.52	44.3
TraesCS1D01G263700.1	Wheat	cytosol	49.03	42.72
Bra039251.1-P	Field mustard	cytosol	44.01	42.25
CDY64867	Canola	cytosol	43.73	41.98
PGSC0003DMT400088528	Potato	cytosol, peroxisome, plastid	15.04	41.86
PGSC0003DMT400091526	Potato	cytosol	27.86	41.84
Bra031467.1-P	Field mustard	cytosol	43.45	41.38
PGSC0003DMT400097234	Potato	cytosol, mitochondrion, plastid	14.48	41.27
TraesCS3D01G401400.1	Wheat	plastid	49.58	40.83
Solyc10g045690.1.1	Tomato	cytosol, nucleus, peroxisome	21.45	40.53
Solyc10g045770.1.1	Tomato	cytosol	12.26	40.37
CDY60083	Canola	vacuole	44.29	39.55
CDY12880	Canola	cytosol, nucleus, vacuole	46.52	39.48
CDY44829	Canola	cytosol	42.62	39.13
CDY64866	Canola	cytosol, nucleus, peroxisome	33.43	38.71
PGSC0003DMT400086504	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	11.98	38.05
CDY13227	Canola	cytosol	17.55	36.84
PGSC0003DMT400089703	Potato	nucleus	15.04	36.0
Solyc10g046820.1.1	Tomato	cytosol, nucleus, peroxisome	17.55	31.98
TraesCS4D01G079900.1	Wheat	cytosol	30.08	31.03

Protein Annotations

EnsemblPlants:TraesCS3D01G394000.1	EnsemblPlantsGene:TraesCS3D01G394000	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF118	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PRINTS:PR00682	SEG:seg	SUPFAM:SSF51197	MapMan:11.6.1.5	:

Description

No Description!

Coordinates

chr3D:+:509076947..509078411

Molecular Weight (calculated)

39554.9 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.181

Length

359 amino acids

Sequence
(BLAST)

001: MATLVFDAAV RSRKDDIPPQ FVWPADEAPS VDGVEEIVVP VVDLAGFLAG DGSADAGGLR DLAAACEKHG FFQVVNHGVD PALLAKAYRC CDAFYAMPLA
101: EKQRAQRRLG ENHGYAGSFV GRFGSKLPWK ETMSFNCSAA PEGARKVVDY FVGVLGEEFR YMGEVWQEYC DEMTRLALDV TDVLAACLGL GRGSLRGFFA
201: GDDSLMRLNR YPPCQQPHLT LGTGPHHDPA SLTLLHQDDV GGLEVFTGGA WRAVRPRSDA FVVNIGDTFS ALTNGRHISC LHRAVVNSSL ARRSLTFFLN
301: PQLDRPVAPP TELLAIDGRP RAYPGFTWRE FLEFTQKHYR SDWRTLDAFA AWINQGRKG

Best Arabidopsis Sequence Match ( AT5G51810.1 )
(BLAST)

001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI

Arabidopsis Description

GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.