CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007894_P001	Maize	cytosol	82.72	80.2
Os07t0169700-01	Rice	plasma membrane	72.25	75.2
TraesCS3A01G399800.1	Wheat	cytosol	67.8	72.35
HORVU3Hr1G089980.2	Barley	cytosol	67.28	71.99
TraesCS3B01G432800.1	Wheat	cytosol	67.8	71.94
TraesCS3D01G393900.1	Wheat	cytosol	66.75	71.63
TraesCS3D01G394000.1	Wheat	cytosol, peroxisome, plastid	66.75	71.03
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	47.64	58.15
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	45.03	55.84
CDY72226	Canola	mitochondrion	37.43	55.21
PGSC0003DMT400086432	Potato	cytosol	22.51	55.13
EER90481	Sorghum	cytosol	54.45	54.88
GSMUA_AchrUn_...	Banana	cytosol	43.46	51.39
CDY49714	Canola	cytosol, nucleus, peroxisome	46.86	51.14
Bra019165.1-P	Field mustard	cytosol	46.6	50.86
PGSC0003DMT400062314	Potato	cytosol	49.21	49.74
KRG91415	Soybean	cytosol	49.48	49.35
Solyc03g006880.2.1	Tomato	cytosol	48.69	49.21
CDY00263	Canola	cytosol, nucleus, peroxisome	35.86	49.1
VIT_16s0022g02310.t01	Wine grape	cytosol	48.95	48.95
AT5G51810.1	Thale cress	cytosol, nucleus, peroxisome	48.43	48.94
CDY27101	Canola	cytosol, nucleus, peroxisome	48.17	48.81
CDX91609	Canola	cytosol, nucleus, peroxisome	48.17	48.68
PGSC0003DMT400036523	Potato	cytosol	39.53	48.55
Bra022565.1-P	Field mustard	cytosol	47.91	48.54
PGSC0003DMT400071866	Potato	cytosol	47.64	48.53
KRH38652	Soybean	cytosol	48.43	48.43
Solyc06g035530.2.1	Tomato	cytosol	47.12	48.39
KRH09174	Soybean	cytosol	38.48	48.36
KRH35405	Soybean	cytosol	46.07	48.22
PGSC0003DMT400091205	Potato	cytosol, nucleus, peroxisome	19.9	48.1
Solyc01g093980.2.1	Tomato	cytosol	45.81	48.08
CDX99892	Canola	cytosol, nucleus, peroxisome	47.64	48.02
AT4G25420.1	Thale cress	cytosol, nucleus, peroxisome	47.38	48.01
PGSC0003DMT400000036	Potato	cytosol	45.81	47.95
CDY00499	Canola	cytosol, nucleus, peroxisome	47.64	47.89
CDX99893	Canola	cytosol, nucleus, peroxisome	47.64	47.89
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	47.64	47.89
CDY55723	Canola	cytosol, nucleus, peroxisome	46.86	47.61
VIT_15s0048g01320.t01	Wine grape	cytosol	47.64	47.4
KRH65199	Soybean	cytosol	47.38	47.38
Bra013890.1-P	Field mustard	cytosol	46.6	47.34
PGSC0003DMT400092587	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	19.9	47.2
CDX94446	Canola	cytosol, nucleus, peroxisome	46.34	47.07
CDX98998	Canola	cytosol, nucleus, peroxisome	46.6	46.97
Solyc11g072310.1.1	Tomato	cytosol	46.6	46.97
PGSC0003DMT400090397	Potato	cytosol	45.81	46.92
PGSC0003DMT400042644	Potato	cytosol	41.1	46.73
CDX70015	Canola	cytosol, nucleus, peroxisome	46.34	46.7
CDX92707	Canola	cytosol, nucleus, peroxisome	46.6	46.48
Bra009285.1-P	Field mustard	cytosol	46.07	46.44
CDY58871	Canola	cytosol, endoplasmic reticulum, peroxisome	45.81	46.3
Bra010064.1-P	Field mustard	cytosol	45.55	46.15
AT5G07200.1	Thale cress	cytosol, nucleus, peroxisome	45.81	46.05
Solyc09g009110.2.1	Tomato	cytosol	45.55	46.03
CDY13228	Canola	cytosol	8.9	45.95
CDX81038	Canola	cytosol, nucleus, peroxisome	45.29	45.77
Bra005927.1-P	Field mustard	cytosol	39.01	45.71
KRH48309	Soybean	cytosol	47.12	45.45
Bra028706.1-P	Field mustard	cytosol	45.03	45.38
CDY52529	Canola	cytosol, nucleus, peroxisome	45.03	45.14
CDY14054	Canola	cytosol, nucleus, peroxisome	44.76	45.12
CDY05017	Canola	cytosol, nucleus, peroxisome	44.76	45.12
AT1G60980.1	Thale cress	cytosol, mitochondrion, peroxisome	44.24	44.95
Solyc06g050110.1.1	Tomato	cytosol	42.67	44.9
Bra027106.1-P	Field mustard	cytosol	43.72	44.41
PGSC0003DMT400088638	Potato	cytosol	28.53	43.08
Bra039251.1-P	Field mustard	cytosol	40.84	41.71
CDY64867	Canola	cytosol	40.58	41.44
OQU87995	Sorghum	plastid	47.91	41.4
Bra031467.1-P	Field mustard	cytosol	40.58	41.11
PGSC0003DMT400090198	Potato	mitochondrion	9.69	41.11
PGSC0003DMT400097234	Potato	cytosol, mitochondrion, plastid	13.35	40.48
PGSC0003DMT400088528	Potato	cytosol, peroxisome, plastid	13.61	40.31
PGSC0003DMT400091526	Potato	cytosol	24.87	39.75
CDY64866	Canola	cytosol, nucleus, peroxisome	32.2	39.68
CDY44829	Canola	cytosol	40.31	39.39
CDY12880	Canola	cytosol, nucleus, vacuole	43.46	39.24
CDY13227	Canola	cytosol	17.54	39.18
CDY60083	Canola	vacuole	41.1	39.05
Solyc10g045690.1.1	Tomato	cytosol, nucleus, peroxisome	19.37	38.95
Solyc10g045770.1.1	Tomato	cytosol	10.99	38.53
PGSC0003DMT400086504	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	11.26	38.05
PGSC0003DMT400089703	Potato	nucleus	14.14	36.0
EER91221	Sorghum	cytosol	28.8	32.07
OQU91363	Sorghum	cytosol	29.84	32.02
Solyc10g046820.1.1	Tomato	cytosol, nucleus, peroxisome	15.97	30.96
KXG38014	Sorghum	cytosol	26.44	29.28
OQU78027	Sorghum	cytosol	35.34	27.11

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	EntrezGene:8060704	UniProt:C5XAC5	InterPro:DIOX_N	EnsemblPlants:EER95912
ProteinID:EER95912	ProteinID:EER95912.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009653	GO:GO:0009686	GO:GO:0009719
GO:GO:0009740	GO:GO:0009791	GO:GO:0009826	GO:GO:0009908	GO:GO:0009987	GO:GO:0016043
GO:GO:0016049	GO:GO:0016491	GO:GO:0040007	GO:GO:0045544	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF118	EnsemblPlantsGene:SORBI_3002G046500	SUPFAM:SSF51197
UniParc:UPI0001A830F1	RefSeq:XP_002459391.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:4363039..4364276

Molecular Weight (calculated)

41882.3 Da

IEP (calculated)

6.376

GRAVY (calculated)

-0.332

Length

382 amino acids

Sequence
(BLAST)

001: MAAAGVVVFD AEVLSREERI PAQFVWPAED RAPSAGGCGV EEIAIPVVDL GEFLRHGDRE LPRGVAEACE RHGFFQVVNH GVPAALLADA YRCLDAFYAR
101: PLADKQRAQR RPGESHGYAS SFTGRFRSCL PWKETLSFNC PAGTGGDTQS AAAVVDYFVD VLGEDYRHMG EVYQEYSDEM ARLAMDVTEV LAAALGLRRG
201: ALRGFFDGGD SIMRLNHYPA CRQPQLTLGT GPHRDPTSLT LLHQDDVGGL QVCAGGGGGG EWRAVRPRAD AFVVNIGDTF AALTDGRHAS CLHRAVVSGD
301: RARRSLAFFF NPPLDRVVRP PDALLLEDEK RRRPRAFPDF TWREFLEFTQ KHYRSDASTM DAFVSWIAGG RGDGHGGRQE GK

Best Arabidopsis Sequence Match ( AT5G51810.1 )
(BLAST)

001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI

Arabidopsis Description

GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.